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| | <StructureSection load='6rkc' size='340' side='right'caption='[[6rkc]], [[Resolution|resolution]] 2.56Å' scene=''> | | <StructureSection load='6rkc' size='340' side='right'caption='[[6rkc]], [[Resolution|resolution]] 2.56Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[6rkc]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Ureaplasma_urealyticum_serovar_7_str._atcc_27819 Ureaplasma urealyticum serovar 7 str. atcc 27819]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RKC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RKC FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6rkc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Ureaplasma_urealyticum_serovar_7_str._ATCC_27819 Ureaplasma urealyticum serovar 7 str. ATCC 27819]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RKC FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PPK:(DIPHOSPHONO)AMINOPHOSPHONIC+ACID'>PPK</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.56Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6rjs|6rjs]], [[6rk5|6rk5]], [[6rk7|6rk7]], [[6rka|6rka]]</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PPK:(DIPHOSPHONO)AMINOPHOSPHONIC+ACID'>PPK</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">metK, UUR7_0462 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=519849 Ureaplasma urealyticum serovar 7 str. ATCC 27819])</td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rkc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rkc OCA], [https://pdbe.org/6rkc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rkc RCSB], [https://www.ebi.ac.uk/pdbsum/6rkc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rkc ProSAT]</span></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_adenosyltransferase Methionine adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.6 2.5.1.6] </span></td></tr> | + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6rkc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rkc OCA], [http://pdbe.org/6rkc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rkc RCSB], [http://www.ebi.ac.uk/pdbsum/6rkc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rkc ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| | </div> | | </div> |
| | <div class="pdbe-citations 6rkc" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 6rkc" style="background-color:#fffaf0;"></div> |
| | + | |
| | + | ==See Also== |
| | + | *[[S-adenosylmethionine synthetase 3D structures|S-adenosylmethionine synthetase 3D structures]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Methionine adenosyltransferase]]
| + | [[Category: Ureaplasma urealyticum serovar 7 str. ATCC 27819]] |
| - | [[Category: Ureaplasma urealyticum serovar 7 str. atcc 27819]] | + | [[Category: Bershtein S]] |
| - | [[Category: Bershtein, S]] | + | [[Category: Kleiner D]] |
| - | [[Category: Kleiner, D]] | + | [[Category: Shahar A]] |
| - | [[Category: Shahar, A]] | + | [[Category: Shmulevich F]] |
| - | [[Category: Shmulevich, F]] | + | [[Category: Zarivach R]] |
| - | [[Category: Zarivach, R]] | + | |
| - | [[Category: Synthetase]]
| + | |
| - | [[Category: Transferase]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Methionine S-adenosyltransferases (MATs) are predominantly homotetramers, comprised of dimers of dimers. The larger, highly conserved intradimeric interface harbors two active sites, making the dimer the obligatory functional unit. However, functionality of the smaller, more diverged, and recently evolved interdimeric interface is largely unknown. Here, we show that the interdimeric interface of Ureaplasmaurealiticum MAT has evolved to control the catalytic activity and structural integrity of the homotetramer in response to product accumulation. When all four active sites are occupied with the product, S-adenosylmethionine (SAM), binding of four additional SAM molecules to the interdimeric interface prompts a approximately 45 degrees shift in the dimer orientation and a concomitant approximately 60% increase in the interface area. This rearrangement inhibits the enzymatic activity by locking the flexible active site loops in a closed state and renders the tetramer resistant to proteolytic degradation. Our findings suggest that the interdimeric interface of MATs is subject to rapid evolutionary changes that tailor the molecular properties of the entire homotetramer to the specific needs of the organism.
The interdimeric interface controls function and stability of Ureaplasma urealiticum methionine S-adenosyltransferase.,Kleiner D, Shmulevich F, Zarivach R, Shahar A, Sharon M, Ben-Nissan G, Bershtein S J Mol Biol. 2019 Dec 6;431(24):4796-4816. doi: 10.1016/j.jmb.2019.09.003. Epub, 2019 Sep 12. PMID:31520601[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Kleiner D, Shmulevich F, Zarivach R, Shahar A, Sharon M, Ben-Nissan G, Bershtein S. The interdimeric interface controls function and stability of Ureaplasma urealiticum methionine S-adenosyltransferase. J Mol Biol. 2019 Dec 6;431(24):4796-4816. doi: 10.1016/j.jmb.2019.09.003. Epub, 2019 Sep 12. PMID:31520601 doi:http://dx.doi.org/10.1016/j.jmb.2019.09.003
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