This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6rpp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:26, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6rpp' size='340' side='right'caption='[[6rpp]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='6rpp' size='340' side='right'caption='[[6rpp]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6rpp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrab Pyrab]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RPP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RPP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6rpp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi_GE5 Pyrococcus abyssi GE5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RPP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RPP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cdc21, PAB2373 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272844 PYRAB])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6rpp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rpp OCA], [http://pdbe.org/6rpp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rpp RCSB], [http://www.ebi.ac.uk/pdbsum/6rpp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rpp ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rpp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rpp OCA], [https://pdbe.org/6rpp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rpp RCSB], [https://www.ebi.ac.uk/pdbsum/6rpp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rpp ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9UYR7_PYRAB Q9UYR7_PYRAB]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pyrab]]
+
[[Category: Pyrococcus abyssi GE5]]
-
[[Category: Beyer, H M]]
+
[[Category: Beyer HM]]
-
[[Category: Iwai, H]]
+
[[Category: Iwai H]]
-
[[Category: Mikula, K M]]
+
[[Category: Mikula KM]]
-
[[Category: Hint]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Intein]]
+
-
[[Category: Protein-splicing]]
+

Current revision

Crystal structure of PabCDC21-1 intein

PDB ID 6rpp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools