6s5f

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Current revision (12:35, 24 January 2024) (edit) (undo)
 
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==Structure of the human RAB39B in complex with GMPPNP==
==Structure of the human RAB39B in complex with GMPPNP==
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<StructureSection load='6s5f' size='340' side='right'caption='[[6s5f]]' scene=''>
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<StructureSection load='6s5f' size='340' side='right'caption='[[6s5f]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6S5F OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6S5F FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6s5f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6S5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6S5F FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6s5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6s5f OCA], [http://pdbe.org/6s5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6s5f RCSB], [http://www.ebi.ac.uk/pdbsum/6s5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6s5f ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6s5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6s5f OCA], [https://pdbe.org/6s5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6s5f RCSB], [https://www.ebi.ac.uk/pdbsum/6s5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6s5f ProSAT]</span></td></tr>
</table>
</table>
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== Disease ==
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[https://www.uniprot.org/uniprot/RB39B_HUMAN RB39B_HUMAN] NON RARE IN EUROPE: Autism;Early-onset parkinsonism-intellectual disability syndrome;X-linked non-syndromic intellectual disability. The disease is caused by variants affecting the gene represented in this entry. The disease is caused by variants affecting the gene represented in this entry. Its association with Parkinson disease is however unclear (PubMed:26739247, PubMed:27459931). According to a number of studies, variations affecting this gene are not a frequent cause of Parkinson disease, suggesting that RAB39B does not play a major role in Parkinson disease etiology (PubMed:26739247, PubMed:27459931).<ref>PMID:26739247</ref> <ref>PMID:27459931</ref>
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== Function ==
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[https://www.uniprot.org/uniprot/RB39B_HUMAN RB39B_HUMAN] Small GTPases Rab involved in autophagy (PubMed:27103069). The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion (PubMed:27103069). May regulate the homeostasis of SNCA/alpha-synuclein. Together with PICK1 proposed to ensure selectively GRIA2 exit from the endoplasmic reticulum to the Golgi and to regulate AMPAR compostion at the post-synapses and thus synaptic transmission (By similarity).[UniProtKB:Q8BHC1]<ref>PMID:27103069</ref>
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==See Also==
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*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Arrowsmith CH]]
[[Category: Arrowsmith CH]]

Current revision

Structure of the human RAB39B in complex with GMPPNP

PDB ID 6s5f

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