6sq3

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Current revision (12:45, 24 January 2024) (edit) (undo)
 
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==Crystal structure of mouse PRMT6 in complex with inhibitor U1==
==Crystal structure of mouse PRMT6 in complex with inhibitor U1==
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<StructureSection load='6sq3' size='340' side='right'caption='[[6sq3]]' scene=''>
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<StructureSection load='6sq3' size='340' side='right'caption='[[6sq3]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SQ3 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6SQ3 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6sq3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SQ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SQ3 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6sq3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sq3 OCA], [http://pdbe.org/6sq3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6sq3 RCSB], [http://www.ebi.ac.uk/pdbsum/6sq3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6sq3 ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6RE:[[2-[(2~{R},3~{S},4~{R},5~{R})-5-(6-AMINOPURIN-9-YL)-3,4-BIS(OXIDANYL)OXOLAN-2-YL]ETHYLAMINO]-AZANYL-METHYLIDENE]AZANIUM'>6RE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sq3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sq3 OCA], [https://pdbe.org/6sq3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sq3 RCSB], [https://www.ebi.ac.uk/pdbsum/6sq3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sq3 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ANM6_MOUSE ANM6_MOUSE] Arginine methyltransferase that can catalyze the formation of both omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA), with a strong preference for the formation of aDMA. Preferentially methylates arginyl residues present in a glycine and arginine-rich domain and displays preference for monomethylated substrates. Specifically mediates the asymmetric dimethylation of histone H3 'Arg-2' to form H3R2me2a. H3R2me2a represents a specific tag for epigenetic transcriptional repression and is mutually exclusive with methylation on histone H3 'Lys-4' (H3K4me2 and H3K4me3). Acts as a transcriptional repressor of various genes such as HOXA2, THBS1 and TP53. Repression of TP53 blocks cellular senescence. Also methylates histone H2A and H4 'Arg-3' (H2AR3me and H4R3me, respectively). Acts as a regulator of DNA base excision during DNA repair by mediating the methylation of DNA polymerase beta (POLB), leading to the stimulation of its polymerase activity by enhancing DNA binding and processivity. Methylates HMGA1. Regulates alternative splicing events. Acts as a transcriptional coactivator of a number of steroid hormone receptors including ESR1, ESR2, PGR and NR3C1. Promotes fasting-induced transcriptional activation of the gluconeogenic program through methylation of the CRTC2 transcription coactivator.<ref>PMID:22904064</ref> <ref>PMID:24570487</ref>
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==See Also==
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*[[Histone methyltransferase 3D structures|Histone methyltransferase 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Mus musculus]]
[[Category: Bonnefond L]]
[[Category: Bonnefond L]]
[[Category: Cavarelli J]]
[[Category: Cavarelli J]]

Current revision

Crystal structure of mouse PRMT6 in complex with inhibitor U1

PDB ID 6sq3

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