6t1f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:52, 24 January 2024) (edit) (undo)
 
Line 1: Line 1:
-
====
+
==Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed to the centromeric parS site==
-
<StructureSection load='6t1f' size='340' side='right'caption='[[6t1f]]' scene=''>
+
<StructureSection load='6t1f' size='340' side='right'caption='[[6t1f]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6t1f]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Caulobacter_vibrioides Caulobacter vibrioides] and [https://en.wikipedia.org/wiki/Caulobacter_vibrioides_NA1000 Caulobacter vibrioides NA1000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T1F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6T1F FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t1f OCA], [https://pdbe.org/6t1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t1f RCSB], [https://www.ebi.ac.uk/pdbsum/6t1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t1f ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t1f OCA], [https://pdbe.org/6t1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t1f RCSB], [https://www.ebi.ac.uk/pdbsum/6t1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t1f ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PARB_CAUVN PARB_CAUVN] Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication.<ref>PMID:9054507</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Proper chromosome segregation is essential in all living organisms. The ParA-ParB-parS system is widely employed for chromosome segregation in bacteria. Previously, we showed that Caulobacter crescentus ParB requires cytidine triphosphate to escape the nucleation site parS and spread by sliding to the neighboring DNA (Jalal et al., 2020). Here, we provide the structural basis for this transition from nucleation to spreading by solving co-crystal structures of a C-terminal domain truncated C. crescentus ParB with parS and with a CTP analog. Nucleating ParB is an open clamp, in which parS is captured at the DNA-binding domain (the DNA-gate). Upon binding CTP, the N-terminal domain (NTD) self-dimerizes to close the NTD-gate of the clamp. The DNA-gate also closes, thus driving parS into a compartment between the DNA-gate and the C-terminal domain. CTP hydrolysis and/or the release of hydrolytic products are likely associated with reopening of the gates to release DNA and recycle ParB. Overall, we suggest a CTP-operated gating mechanism that regulates ParB nucleation, spreading, and recycling.
 +
 +
A CTP-dependent gating mechanism enables ParB spreading on DNA.,Jalal AS, Tran NT, Stevenson CE, Chimthanawala A, Badrinarayanan A, Lawson DM, Le TB Elife. 2021 Aug 16;10. pii: 69676. doi: 10.7554/eLife.69676. PMID:34397383<ref>PMID:34397383</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6t1f" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Caulobacter vibrioides]]
 +
[[Category: Caulobacter vibrioides NA1000]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Z-disk]]
+
[[Category: Jalal ASB]]
 +
[[Category: Lawson DM]]
 +
[[Category: Le TBK]]
 +
[[Category: Moreno-Herrero F]]
 +
[[Category: Pastrana CL]]
 +
[[Category: Stevenson CEM]]
 +
[[Category: Tran NT]]

Current revision

Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed to the centromeric parS site

PDB ID 6t1f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools