6t66

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Current revision (12:55, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6t66' size='340' side='right'caption='[[6t66]], [[Resolution|resolution]] 3.90&Aring;' scene=''>
<StructureSection load='6t66' size='340' side='right'caption='[[6t66]], [[Resolution|resolution]] 3.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6t66]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T66 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6T66 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6t66]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T66 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6T66 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.9&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dnaB, BC353_11625, C9J66_17780, ERS013165_03687, ERS013200_03939, ERS013206_03692, F0315_03560, FLM02_14585, HPY05_12185 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/DNA_helicase DNA helicase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.4.12 3.6.4.12] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t66 OCA], [https://pdbe.org/6t66 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t66 RCSB], [https://www.ebi.ac.uk/pdbsum/6t66 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t66 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t66 OCA], [https://pdbe.org/6t66 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t66 RCSB], [https://www.ebi.ac.uk/pdbsum/6t66 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t66 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/A0A085R2T8_VIBCL A0A085R2T8_VIBCL]] Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins.[ARBA:ARBA00003574][RuleBase:RU362085]
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[https://www.uniprot.org/uniprot/Q9KUY7_VIBCH Q9KUY7_VIBCH] Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins.[ARBA:ARBA00003574][RuleBase:RU362085]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6t66" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6t66" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Helicase 3D structures|Helicase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillo virgola del koch trevisan 1884]]
 
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[[Category: DNA helicase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Legrand, P]]
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[[Category: Vibrio cholerae]]
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[[Category: Quevillon-Cheruel, S]]
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[[Category: Legrand P]]
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[[Category: Sierra-Gallay, I Li de la]]
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[[Category: Li de la Sierra-Gallay I]]
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[[Category: Walbott, H]]
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[[Category: Quevillon-Cheruel S]]
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[[Category: Helicase]]
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[[Category: Walbott H]]
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[[Category: Replication]]
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Current revision

Crystal structure of the Vibrio cholerae replicative helicase (DnaB) with GDP-AlF4

PDB ID 6t66

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