6t7j

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Current revision (12:56, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6t7j' size='340' side='right'caption='[[6t7j]], [[Resolution|resolution]] 2.43&Aring;' scene=''>
<StructureSection load='6t7j' size='340' side='right'caption='[[6t7j]], [[Resolution|resolution]] 2.43&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6t7j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_sp._am4 Thermococcus sp. am4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T7J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6T7J FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6t7j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_sp._AM4 Thermococcus sp. AM4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T7J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6T7J FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BU3:(R,R)-2,3-BUTANEDIOL'>BU3</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=MSK:Broken+Fe4S4+cluster'>MSK</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.43&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TAM4_1067 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246969 Thermococcus sp. AM4])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BU3:(R,R)-2,3-BUTANEDIOL'>BU3</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=MSK:Broken+Fe4S4+cluster'>MSK</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Anaerobic_carbon-monoxide_dehydrogenase Anaerobic carbon-monoxide dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.7.4 1.2.7.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t7j OCA], [https://pdbe.org/6t7j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t7j RCSB], [https://www.ebi.ac.uk/pdbsum/6t7j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t7j ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t7j OCA], [https://pdbe.org/6t7j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t7j RCSB], [https://www.ebi.ac.uk/pdbsum/6t7j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t7j ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/B7R5K0_9EURY B7R5K0_9EURY]] CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH).[ARBA:ARBA00002452]
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[https://www.uniprot.org/uniprot/B7R5K0_9EURY B7R5K0_9EURY] CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH).[ARBA:ARBA00002452]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Anaerobic carbon-monoxide dehydrogenase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Thermococcus sp. am4]]
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[[Category: Thermococcus sp. AM4]]
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[[Category: Dobbek, H]]
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[[Category: Dobbek H]]
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[[Category: Jeoung, J H]]
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[[Category: Jeoung J-H]]
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[[Category: Co dehydrogenase]]
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[[Category: Ni-free cluster c]]
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[[Category: Oxidoreductase]]
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Current revision

As-isolated Ni-free crystal structure of carbon monoxide dehydrogenase from Thermococcus sp. AM4 produced without CooC maturase

PDB ID 6t7j

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