This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6tw4
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='6tw4' size='340' side='right'caption='[[6tw4]], [[Resolution|resolution]] 1.73Å' scene=''> | <StructureSection load='6tw4' size='340' side='right'caption='[[6tw4]], [[Resolution|resolution]] 1.73Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6tw4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[6tw4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TW4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TW4 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NZW:~{N}-[2-[(2~{S})-2-[[(1~{S})-1-(4-methoxyphenyl)ethyl]carbamoyl]pyrrolidin-1-yl]-2-oxidanylidene-ethyl]quinoline-2-carboxamide'>NZW</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.73Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NZW:~{N}-[2-[(2~{S})-2-[[(1~{S})-1-(4-methoxyphenyl)ethyl]carbamoyl]pyrrolidin-1-yl]-2-oxidanylidene-ethyl]quinoline-2-carboxamide'>NZW</scene></td></tr> | |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tw4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tw4 OCA], [https://pdbe.org/6tw4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tw4 RCSB], [https://www.ebi.ac.uk/pdbsum/6tw4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tw4 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tw4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tw4 OCA], [https://pdbe.org/6tw4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tw4 RCSB], [https://www.ebi.ac.uk/pdbsum/6tw4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tw4 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/RADA_PYRFU RADA_PYRFU] Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 24: | Line 24: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Pyrococcus furiosus DSM 3638]] |
| - | [[Category: Abell | + | [[Category: Abell C]] |
| - | [[Category: Coyne | + | [[Category: Coyne AG]] |
| - | [[Category: Hyvonen | + | [[Category: Hyvonen M]] |
| - | [[Category: Marsh | + | [[Category: Marsh ME]] |
| - | [[Category: Scott | + | [[Category: Scott DE]] |
| - | [[Category: Skidmore | + | [[Category: Skidmore J]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
HumRadA22F in complex with compound 6
| |||||||||||
