6xv5
From Proteopedia
(Difference between revisions)
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==Crystal structure of penicillin-binding protein 2 from Yersinia pestis in complex with ertapenem== | ==Crystal structure of penicillin-binding protein 2 from Yersinia pestis in complex with ertapenem== | ||
| - | <StructureSection load='6xv5' size='340' side='right'caption='[[6xv5]]' scene=''> | + | <StructureSection load='6xv5' size='340' side='right'caption='[[6xv5]], [[Resolution|resolution]] 2.67Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XV5 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6xv5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XV5 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xv5 OCA], [https://pdbe.org/6xv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xv5 RCSB], [https://www.ebi.ac.uk/pdbsum/6xv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xv5 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.673Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=O2E:(2~{S},3~{R})-2-[(2~{S},3~{R})-1-[(2~{R})-2-azanyl-3-oxidanylidene-propoxy]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic+acid'>O2E</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xv5 OCA], [https://pdbe.org/6xv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xv5 RCSB], [https://www.ebi.ac.uk/pdbsum/6xv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xv5 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A5P8YJF3_YERPE A0A5P8YJF3_YERPE] Catalyzes cross-linking of the peptidoglycan cell wall.[HAMAP-Rule:MF_02081] | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Yersinia pestis]] | ||
[[Category: Dawson A]] | [[Category: Dawson A]] | ||
[[Category: Hunter WN]] | [[Category: Hunter WN]] | ||
[[Category: Pankov G]] | [[Category: Pankov G]] | ||
Current revision
Crystal structure of penicillin-binding protein 2 from Yersinia pestis in complex with ertapenem
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