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| <StructureSection load='6xya' size='340' side='right'caption='[[6xya]], [[Resolution|resolution]] 1.35Å' scene=''> | | <StructureSection load='6xya' size='340' side='right'caption='[[6xya]], [[Resolution|resolution]] 1.35Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6xya]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Phlebovirus_ah12/china/2010 Phlebovirus ah12/china/2010]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XYA OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6XYA FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6xya]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/SFTS_virus_AH12 SFTS virus AH12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XYA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XYA FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MGP:7-METHYL-GUANOSINE-5-TRIPHOSPHATE'>MGP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6xya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xya OCA], [http://pdbe.org/6xya PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6xya RCSB], [http://www.ebi.ac.uk/pdbsum/6xya PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6xya ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MGP:7-METHYL-GUANOSINE-5-TRIPHOSPHATE'>MGP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xya OCA], [https://pdbe.org/6xya PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xya RCSB], [https://www.ebi.ac.uk/pdbsum/6xya PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xya ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/L_SFTS L_SFTS] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Phlebovirus ah12/china/2010]] | + | [[Category: SFTS virus AH12]] |
- | [[Category: Gogrefe, N]] | + | [[Category: Gogrefe N]] |
- | [[Category: Guenther, S]] | + | [[Category: Guenther S]] |
- | [[Category: Rosenthal, M]] | + | [[Category: Rosenthal M]] |
- | [[Category: Bunyavirus]]
| + | |
- | [[Category: Cap binding]]
| + | |
- | [[Category: Cap-snatching]]
| + | |
- | [[Category: Viral polymerase]]
| + | |
- | [[Category: Viral protein]]
| + | |
| Structural highlights
Function
L_SFTS
Publication Abstract from PubMed
The Bunyavirales order contains several emerging viruses with high epidemic potential, including Severe fever with thrombocytopenia syndrome virus (SFTSV). The lack of medical countermeasures, such as vaccines and antivirals, is a limiting factor for the containment of any virus outbreak. To develop such antivirals a profound understanding of the viral replication process is essential. The L protein of bunyaviruses is a multi-functional and multi-domain protein performing both virus transcription and genome replication and, therefore, is an ideal drug target. We established expression and purification procedures for the full-length L protein of SFTSV. By combining single-particle electron cryo-microscopy and X-ray crystallography, we obtained 3D models covering approximately 70% of the SFTSV L protein in the apo-conformation including the polymerase core region, the endonuclease and the cap-binding domain. We compared this first L structure of the Phenuiviridae family to the structures of La Crosse peribunyavirus L protein and influenza orthomyxovirus polymerase. Together with a comprehensive biochemical characterization of the distinct functions of SFTSV L protein, this work provides a solid framework for future structural and functional studies of L protein-RNA interactions and the development of antiviral strategies against this group of emerging human pathogens.
Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein.,Vogel D, Thorkelsson SR, Quemin ERJ, Meier K, Kouba T, Gogrefe N, Busch C, Reindl S, Gunther S, Cusack S, Grunewald K, Rosenthal M Nucleic Acids Res. 2020 Apr 20. pii: 5822961. doi: 10.1093/nar/gkaa253. PMID:32313945[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Vogel D, Thorkelsson SR, Quemin ERJ, Meier K, Kouba T, Gogrefe N, Busch C, Reindl S, Gunther S, Cusack S, Grunewald K, Rosenthal M. Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein. Nucleic Acids Res. 2020 Apr 20. pii: 5822961. doi: 10.1093/nar/gkaa253. PMID:32313945 doi:http://dx.doi.org/10.1093/nar/gkaa253
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