We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

6yi6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:27, 24 January 2024) (edit) (undo)
 
Line 1: Line 1:
==Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin==
==Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin==
-
<StructureSection load='6yi6' size='340' side='right'caption='[[6yi6]]' scene=''>
+
<StructureSection load='6yi6' size='340' side='right'caption='[[6yi6]], [[Resolution|resolution]] 1.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YI6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YI6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6yi6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YI6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YI6 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yi6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yi6 OCA], [https://pdbe.org/6yi6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yi6 RCSB], [https://www.ebi.ac.uk/pdbsum/6yi6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yi6 ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.44&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=ORK:(2~{S})-2-[[(2~{S})-4-methyl-2-[[oxidanyl-[(1~{S})-2-phenyl-1-(phenylmethoxycarbonylamino)ethyl]phosphoryl]amino]pentanoyl]amino]propanoic+acid'>ORK</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yi6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yi6 OCA], [https://pdbe.org/6yi6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yi6 RCSB], [https://www.ebi.ac.uk/pdbsum/6yi6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yi6 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/THER_GEOSE THER_GEOSE] Extracellular zinc metalloprotease.<ref>PMID:3149972</ref>
 +
 +
==See Also==
 +
*[[Thermolysin 3D structures|Thermolysin 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Geobacillus stearothermophilus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Heine A]]
[[Category: Heine A]]
[[Category: Klebe G]]
[[Category: Klebe G]]
[[Category: Kljajic M]]
[[Category: Kljajic M]]

Current revision

Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin

PDB ID 6yi6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools