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| <StructureSection load='6z1z' size='340' side='right'caption='[[6z1z]], [[Resolution|resolution]] 1.70Å' scene=''> | | <StructureSection load='6z1z' size='340' side='right'caption='[[6z1z]], [[Resolution|resolution]] 1.70Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6z1z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Z1Z OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6Z1Z FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6z1z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Z1Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Z1Z FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6rlr|6rlr]], [[6z1v|6z1v]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6z1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6z1z OCA], [http://pdbe.org/6z1z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6z1z RCSB], [http://www.ebi.ac.uk/pdbsum/6z1z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6z1z ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6z1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6z1z OCA], [https://pdbe.org/6z1z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6z1z RCSB], [https://www.ebi.ac.uk/pdbsum/6z1z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6z1z ProSAT]</span></td></tr> |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Camelus glama]] | + | [[Category: Lama glama]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Gros, P]] | + | [[Category: Gros P]] |
- | [[Category: Kroon-Batenburg, L M.J]] | + | [[Category: Kroon-Batenburg LMJ]] |
- | [[Category: Lutz, M]] | + | [[Category: Lutz M]] |
- | [[Category: Neviani, N]] | + | [[Category: Neviani N]] |
- | [[Category: Oosterheert, W]] | + | [[Category: Oosterheert W]] |
- | [[Category: Pearce, N M]] | + | [[Category: Pearce NM]] |
- | [[Category: Cd9-binding]]
| + | |
- | [[Category: Immune system]]
| + | |
- | [[Category: Nanobody]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Tetraspanins are eukaryotic membrane proteins that contribute to a variety of signaling processes by organizing partner-receptor molecules in the plasma membrane. How tetraspanins bind and cluster partner receptors into tetraspanin-enriched microdomains is unknown. Here, we present crystal structures of the large extracellular loop of CD9 bound to nanobodies 4C8 and 4E8 and, the cryo-EM structure of 4C8-bound CD9 in complex with its partner EWI-F. CD9-EWI-F displays a tetrameric arrangement with two central EWI-F molecules, dimerized through their ectodomains, and two CD9 molecules, one bound to each EWI-F transmembrane helix through CD9-helices h3 and h4. In the crystal structures, nanobodies 4C8 and 4E8 bind CD9 at loops C and D, which is in agreement with the 4C8 conformation in the CD9-EWI-F complex. The complex varies from nearly twofold symmetric (with the two CD9 copies nearly anti-parallel) to ca. 50 degrees bent arrangements. This flexible arrangement of CD9-EWI-F with potential CD9 homo-dimerization at either end provides a "concatenation model" for forming short linear or circular assemblies, which may explain the occurrence of tetraspanin-enriched microdomains.
Implications for tetraspanin-enriched microdomain assembly based on structures of CD9 with EWI-F.,Oosterheert W, Xenaki KT, Neviani V, Pos W, Doulkeridou S, Manshande J, Pearce NM, Kroon-Batenburg LM, Lutz M, van Bergen En Henegouwen PM, Gros P Life Sci Alliance. 2020 Sep 21;3(11). pii: 3/11/e202000883. doi:, 10.26508/lsa.202000883. Print 2020 Nov. PMID:32958604[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Oosterheert W, Xenaki KT, Neviani V, Pos W, Doulkeridou S, Manshande J, Pearce NM, Kroon-Batenburg LM, Lutz M, van Bergen En Henegouwen PM, Gros P. Implications for tetraspanin-enriched microdomain assembly based on structures of CD9 with EWI-F. Life Sci Alliance. 2020 Sep 21;3(11). pii: 3/11/e202000883. doi:, 10.26508/lsa.202000883. Print 2020 Nov. PMID:32958604 doi:http://dx.doi.org/10.26508/lsa.202000883
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