8q90
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Halophilic Lrp transcription factor== | |
+ | <StructureSection load='8q90' size='340' side='right'caption='[[8q90]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8q90]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haloferax_mediterranei Haloferax mediterranei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8Q90 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8Q90 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8q90 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8q90 OCA], [https://pdbe.org/8q90 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8q90 RCSB], [https://www.ebi.ac.uk/pdbsum/8q90 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8q90 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/I3R177_HALMT I3R177_HALMT] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Haloferax mediterranei, an extreme halophilic archaeon thriving in hypersaline environments, has acquired significant attention in biotechnological and biochemical research due to its remarkable ability to flourish in extreme salinity conditions. Transcription factors, essential in regulating diverse cellular processes, have become focal points in understanding its adaptability. This study delves into the role of the Lrp transcription factor, exploring its modulation of glnA, nasABC, and lrp gene promoters in vivo through beta-galactosidase assays. Remarkably, our findings propose Lrp as the pioneering transcriptional regulator of nitrogen metabolism identified in a haloarchaeon. This study suggests its potential role in activating or repressing assimilatory pathway enzymes (GlnA and NasA). The interaction between Lrp and these promoters is analyzed using Electrophoretic Mobility Shift Assay and Differential Scanning Fluorimetry, highlighting l-glutamine's indispensable role in stabilizing the Lrp-DNA complex. Our research uncovers that halophilic Lrp forms octameric structures in the presence of l-glutamine. The study reveals the three-dimensional structure of the Lrp as a homodimer using X-ray crystallography, confirming this state in solution by Small-Angle X-ray Scattering. These findings illuminate the complex molecular mechanisms driving Hfx. mediterranei's nitrogen metabolism, offering valuable insights about its gene expression regulation and enriching our comprehension of extremophile biology. | ||
- | + | Global Lrp regulator protein from Haloferax mediterranei: Transcriptional analysis and structural characterization.,Matarredona L, Garcia-Bonete MJ, Guio J, Camacho M, Fillat MF, Esclapez J, Bonete MJ Int J Biol Macromol. 2024 Jan 18;260(Pt 2):129541. doi: , 10.1016/j.ijbiomac.2024.129541. PMID:38244746<ref>PMID:38244746</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 8q90" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Haloferax mediterranei]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Bonete M-J]] | ||
+ | [[Category: Garcia-Bonete MJ]] |
Revision as of 11:45, 1 February 2024
Halophilic Lrp transcription factor
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