6zj6

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Current revision (11:53, 1 February 2024) (edit) (undo)
 
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<StructureSection load='6zj6' size='340' side='right'caption='[[6zj6]], [[Resolution|resolution]] 1.09&Aring;' scene=''>
<StructureSection load='6zj6' size='340' side='right'caption='[[6zj6]], [[Resolution|resolution]] 1.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6zj6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_sp._xb1a Bacteroides sp. xb1a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZJ6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6ZJ6 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6zj6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_xylanisolvens_XB1A Bacteroides xylanisolvens XB1A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZJ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZJ6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=IFM:5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE'>IFM</scene>, <scene name='pdbligand=QTE:methylcyclohexane'>QTE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.09&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[6zdc|6zdc]], [[6zdf|6zdf]], [[6zdk|6zdk]], [[6zdl|6zdl]], [[6zfa|6zfa]], [[6zfq|6zfq]], [[6zfn|6zfn]], [[6zj5|6zj5]], [[6zj1|6zj1]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=IFM:5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE'>IFM</scene>, <scene name='pdbligand=QTE:methylcyclohexane'>QTE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BXY_34140 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=657309 Bacteroides sp. XB1A])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zj6 OCA], [https://pdbe.org/6zj6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zj6 RCSB], [https://www.ebi.ac.uk/pdbsum/6zj6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zj6 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6zj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zj6 OCA], [http://pdbe.org/6zj6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6zj6 RCSB], [http://www.ebi.ac.uk/pdbsum/6zj6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6zj6 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D6D1V7_9BACE D6D1V7_9BACE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacteroides sp. xb1a]]
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[[Category: Bacteroides xylanisolvens XB1A]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Alonzi, D S]]
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[[Category: Alonzi DS]]
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[[Category: Butters, T D]]
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[[Category: Butters TD]]
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[[Category: Davies, G J]]
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[[Category: Davies GJ]]
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[[Category: Davies, S]]
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[[Category: Davies S]]
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[[Category: Fernandes, P Z]]
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[[Category: Fernandes PZ]]
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[[Category: Hakki, Z]]
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[[Category: Hakki Z]]
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[[Category: Hill, M]]
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[[Category: Hill M]]
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[[Category: Howe, J D]]
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[[Category: Howe JD]]
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[[Category: Sobala, L F]]
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[[Category: Sobala LF]]
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[[Category: Stamataki, Z]]
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[[Category: Stamataki Z]]
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[[Category: Thompson, A J]]
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[[Category: Thompson AJ]]
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[[Category: Williams, S J]]
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[[Category: Williams SJ]]
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[[Category: Zitzmann, N]]
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[[Category: Zitzmann N]]
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[[Category: Hydrolase]]
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[[Category: Mannosidase]]
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[[Category: Retaining]]
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Current revision

Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with cyclohexylmethyl-Glc-1,3-isofagomine

PDB ID 6zj6

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