|
|
| Line 3: |
Line 3: |
| | <StructureSection load='7a54' size='340' side='right'caption='[[7a54]], [[Resolution|resolution]] 2.70Å' scene=''> | | <StructureSection load='7a54' size='340' side='right'caption='[[7a54]], [[Resolution|resolution]] 2.70Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[7a54]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"diplococcus_pneumoniae"_(klein_1884)_weichselbaum_1886 "diplococcus pneumoniae" (klein 1884) weichselbaum 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7A54 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7A54 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7a54]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7A54 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7A54 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nanA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1313 "Diplococcus pneumoniae" (Klein 1884) Weichselbaum 1886])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Exo-alpha-sialidase Exo-alpha-sialidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.18 3.2.1.18] </span></td></tr>
| + | |
| | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7a54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a54 OCA], [https://pdbe.org/7a54 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7a54 RCSB], [https://www.ebi.ac.uk/pdbsum/7a54 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7a54 ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7a54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a54 OCA], [https://pdbe.org/7a54 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7a54 RCSB], [https://www.ebi.ac.uk/pdbsum/7a54 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7a54 ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/NANA_STREE NANA_STREE] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
| Line 22: |
Line 23: |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Exo-alpha-sialidase]] | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Bouckaert, J]] | + | [[Category: Streptococcus pneumoniae]] |
| - | [[Category: Bridot, C]] | + | [[Category: Bouckaert J]] |
| - | [[Category: Catalytic domain]] | + | [[Category: Bridot C]] |
| - | [[Category: Dana]]
| + | |
| - | [[Category: Sialidase]]
| + | |
| - | [[Category: Structural protein]]
| + | |
| Structural highlights
Function
NANA_STREE
Publication Abstract from PubMed
Bacterial sialidases (SA) are validated drug targets expressed by common human pathogens such as Streptococcus pneumoniae, Vibrio cholerae or Clostridium perfringens. Non-covalent inhibitors of bacterial SA capable of reaching the submicromolar level are rarely reported. We developed multi- and polyvalent compounds based on the transition state analogue 2-deoxy-2,3-didehydro-N-acetylneuraminic (DANA). Poly-DANA inhibits the catalytic activity of SA from S. pneumoniae (NanA) and the symbiotic microorganism B. thetaiotaomicron (BtSA) at the picomolar and low nanomolar levels when expressed in moles of molecules and of DANA, respectively. Each DANA grafted to the polymer surpasses the inhibitory potential of the monovalent analogue by more than four orders of magnitude, which represents the highest multivalent effect reported so far for an enzyme inhibition. The synergistic interaction was shown to operate in the catalytic domain exclusively, and not in the flanked carbohydrate-binding module (CBM). These results offers interesting perspectives for the multivalent inhibition of other SA families lacking a CBM, such as viral, parasitic or human SA..
Polyvalent transition-state analogues of sialyl substrates strongly inhibit bacterial sialidases.,Assailly C, Bridot C, Saumonneau A, Lottin P, Roubinet B, Krammer EM, Francois F, Vena F, Landemarre L, Alvarez-Dorta D, Deniaud D, Grandjean C, Tellier C, Pascual S, Montembault V, Fontaine L, Daligault F, Bouckaert J, Gouin SG Chemistry. 2020 Nov 5. doi: 10.1002/chem.202004672. PMID:33150981[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Assailly C, Bridot C, Saumonneau A, Lottin P, Roubinet B, Krammer EM, Francois F, Vena F, Landemarre L, Alvarez-Dorta D, Deniaud D, Grandjean C, Tellier C, Pascual S, Montembault V, Fontaine L, Daligault F, Bouckaert J, Gouin SG. Polyvalent transition-state analogues of sialyl substrates strongly inhibit bacterial sialidases. Chemistry. 2020 Nov 5. doi: 10.1002/chem.202004672. PMID:33150981 doi:http://dx.doi.org/10.1002/chem.202004672
|