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| <StructureSection load='7a7b' size='340' side='right'caption='[[7a7b]], [[Resolution|resolution]] 2.90Å' scene=''> | | <StructureSection load='7a7b' size='340' side='right'caption='[[7a7b]], [[Resolution|resolution]] 2.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[7a7b]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Staac Staac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7A7B OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7A7B FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7a7b]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_COL Staphylococcus aureus subsp. aureus COL]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7A7B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7A7B FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SACOL1520 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=93062 STAAC])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7a7b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a7b OCA], [http://pdbe.org/7a7b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7a7b RCSB], [http://www.ebi.ac.uk/pdbsum/7a7b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7a7b ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7a7b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a7b OCA], [https://pdbe.org/7a7b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7a7b RCSB], [https://www.ebi.ac.uk/pdbsum/7a7b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7a7b ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A0H2WWS2_STAAC A0A0H2WWS2_STAAC] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Staac]] | + | [[Category: Staphylococcus aureus subsp. aureus COL]] |
- | [[Category: Hammerstad, M]] | + | [[Category: Hammerstad M]] |
- | [[Category: Hersleth, H P]] | + | [[Category: Hersleth H-P]] |
- | [[Category: Disulfide reductase]]
| + | |
- | [[Category: Fad]]
| + | |
- | [[Category: Flavoprotein]]
| + | |
- | [[Category: Nadph]]
| + | |
- | [[Category: Oxidoreductase]]
| + | |
| Structural highlights
Function
A0A0H2WWS2_STAAC
Publication Abstract from PubMed
Low G+C Gram-positive Firmicutes, such as the clinically important pathogens Staphylococcus aureus and Bacillus cereus, use the low-molecular weight thiol bacillithiol (BSH) as a defense mechanism to buffer the intracellular redox environment and counteract oxidative stress encountered by human neutrophils during infections. The protein YpdA has recently been shown to function as an essential NADPH-dependent reductase of oxidized bacillithiol disulfide (BSSB) resulting from stress responses and is crucial for maintaining the reduced pool of BSH and cellular redox balance. In this work, we present the first crystallographic structures of YpdAs, namely, those from S. aureus and B. cereus. Our analyses reveal a uniquely organized biological tetramer; however, the structure of the monomeric subunit is highly similar to those of other flavoprotein disulfide reductases. The absence of a redox active cysteine in the vicinity of the FAD isoalloxazine ring implies a new direct disulfide reduction mechanism, which is backed by the presence of a potentially gated channel, serving as a putative binding site for BSSB in the proximity of the FAD cofactor. We also report enzymatic activities for both YpdAs, which along with the structures presented in this work provide important structural and functional insight into a new class of FAD-containing NADPH-dependent oxidoreductases, related to the emerging fight against pathogenic bacteria.
The Crystal Structures of Bacillithiol Disulfide Reductase Bdr (YpdA) Provide Structural and Functional Insight into a New Type of FAD-Containing NADPH-Dependent Oxidoreductase.,Hammerstad M, Gudim I, Hersleth HP Biochemistry. 2020 Dec 29;59(51):4793-4798. doi: 10.1021/acs.biochem.0c00745., Epub 2020 Dec 16. PMID:33326741[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Hammerstad M, Gudim I, Hersleth HP. The Crystal Structures of Bacillithiol Disulfide Reductase Bdr (YpdA) Provide Structural and Functional Insight into a New Type of FAD-Containing NADPH-Dependent Oxidoreductase. Biochemistry. 2020 Dec 29;59(51):4793-4798. doi: 10.1021/acs.biochem.0c00745., Epub 2020 Dec 16. PMID:33326741 doi:http://dx.doi.org/10.1021/acs.biochem.0c00745
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