7a8x

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Current revision (12:05, 1 February 2024) (edit) (undo)
 
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==Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikC with the HMA domain of Pikh-1 from rice (Oryza sativa)==
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<StructureSection load='7a8x' size='340' side='right'caption='[[7a8x]]' scene=''>
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<StructureSection load='7a8x' size='340' side='right'caption='[[7a8x]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7a8x]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryza_sativa_Japonica_Group Oryza sativa Japonica Group] and [https://en.wikipedia.org/wiki/Pyricularia_oryzae_70-15 Pyricularia oryzae 70-15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7A8X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7A8X FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7a8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a8x OCA], [https://pdbe.org/7a8x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7a8x RCSB], [https://www.ebi.ac.uk/pdbsum/7a8x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7a8x ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7a8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a8x OCA], [https://pdbe.org/7a8x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7a8x RCSB], [https://www.ebi.ac.uk/pdbsum/7a8x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7a8x ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D5L9G5_ORYSJ D5L9G5_ORYSJ]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Arms race co-evolution drives rapid adaptive changes in pathogens and in the immune systems of their hosts. Plant intracellular NLR immune receptors detect effectors delivered by pathogens to promote susceptibility, activating an immune response that halts colonization. As a consequence, pathogen effectors evolve to escape immune recognition and are highly variable. In turn, NLR receptors are one of the most diverse protein families in plants, and this variability underpins differential recognition of effector variants. The molecular mechanisms underlying natural variation in effector recognition by NLRs are starting to be elucidated. The rice NLR pair Pik-1/Pik-2 recognizes AVR-Pik effectors from the blast fungus Magnaporthe oryzae, triggering immune responses that limit rice blast infection. Allelic variation in a heavy metal associated (HMA) domain integrated in the receptor Pik-1 confers differential binding to AVR-Pik variants, determining resistance specificity. Previous mechanistic studies uncovered how a Pik allele, Pikm, has extended recognition to effector variants through a specialized HMA/AVR-Pik binding interface. Here, we reveal the mechanistic basis of extended recognition specificity conferred by another Pik allele, Pikh. A single residue in Pikh-HMA increases binding to AVR-Pik variants, leading to an extended effector response in planta. The crystal structure of Pikh-HMA in complex with an AVR-Pik variant confirmed that Pikh and Pikm use a similar molecular mechanism to extend their pathogen recognition profile. This study shows how different NLR receptor alleles functionally converge to extend recognition specificity to pathogen effectors.
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The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface.,De la Concepcion JC, Maidment JHR, Longya A, Xiao G, Franceschetti M, Banfield MJ PLoS Pathog. 2021 Mar 1;17(3):e1009368. doi: 10.1371/journal.ppat.1009368. , eCollection 2021 Mar. PMID:33647072<ref>PMID:33647072</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7a8x" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Avirulence protein 3D structures|Avirulence protein 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Z-disk]]
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[[Category: Oryza sativa Japonica Group]]
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[[Category: Pyricularia oryzae 70-15]]
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[[Category: Banfield MJ]]
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[[Category: Franceschetti M]]
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[[Category: Maidment JHR]]
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[[Category: Xiao G]]

Current revision

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikC with the HMA domain of Pikh-1 from rice (Oryza sativa)

PDB ID 7a8x

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