7ney

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:34, 1 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7ney' size='340' side='right'caption='[[7ney]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
<StructureSection load='7ney' size='340' side='right'caption='[[7ney]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7ney]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Hypai Hypai]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NEY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7ney]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichoderma_atroviride_IMI_206040 Trichoderma atroviride IMI 206040]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NEY FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4LU:1-DEOXY-5-O-PHOSPHONO-1-(3,3,4,5-TETRAMETHYL-9,11-DIOXO-2,3,8,9,10,11-HEXAHYDRO-7H-QUINOLINO[1,8-FG]PTERIDIN-12-IUM-7-YL)-D-RIBITOL'>4LU</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FDC1, TRIATDRAFT_53567 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=452589 HYPAI])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4LU:1-DEOXY-5-O-PHOSPHONO-1-(3,3,4,5-TETRAMETHYL-9,11-DIOXO-2,3,8,9,10,11-HEXAHYDRO-7H-QUINOLINO[1,8-FG]PTERIDIN-12-IUM-7-YL)-D-RIBITOL'>4LU</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phenacrylate_decarboxylase Phenacrylate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.102 4.1.1.102] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ney FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ney OCA], [https://pdbe.org/7ney PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ney RCSB], [https://www.ebi.ac.uk/pdbsum/7ney PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ney ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ney FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ney OCA], [https://pdbe.org/7ney PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ney RCSB], [https://www.ebi.ac.uk/pdbsum/7ney PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ney ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/G9NLP8_HYPAI G9NLP8_HYPAI]] Catalyzes the reversible decarboxylation of aromatic carboxylic acids like ferulic acid, p-coumaric acid or cinnamic acid, producing the corresponding vinyl derivatives 4-vinylphenol, 4-vinylguaiacol, and styrene, respectively, which play the role of aroma metabolites.[HAMAP-Rule:MF_03196]
+
[https://www.uniprot.org/uniprot/G9NLP8_HYPAI G9NLP8_HYPAI] Catalyzes the reversible decarboxylation of aromatic carboxylic acids like ferulic acid, p-coumaric acid or cinnamic acid, producing the corresponding vinyl derivatives 4-vinylphenol, 4-vinylguaiacol, and styrene, respectively, which play the role of aroma metabolites.[HAMAP-Rule:MF_03196]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Hypai]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Phenacrylate decarboxylase]]
+
[[Category: Trichoderma atroviride IMI 206040]]
-
[[Category: Leys, D]]
+
[[Category: Leys D]]
-
[[Category: Saaret, A]]
+
[[Category: Saaret A]]
-
[[Category: Decarboxylase]]
+
-
[[Category: Lyase]]
+
-
[[Category: Prfmn]]
+

Current revision

Structure of T. atroviride Fdc wild-type (TaFdc) in complex with prFMN

PDB ID 7ney

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/7ney"
Personal tools