7oj7
From Proteopedia
(Difference between revisions)
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==Crystal structure of human coxsackievirus A24v in complex with a pentavalent N-acetylneuraminic acid conjugate== | ==Crystal structure of human coxsackievirus A24v in complex with a pentavalent N-acetylneuraminic acid conjugate== | ||
| - | <StructureSection load='7oj7' size='340' side='right'caption='[[7oj7]]' scene=''> | + | <StructureSection load='7oj7' size='340' side='right'caption='[[7oj7]], [[Resolution|resolution]] 1.78Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OJ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OJ7 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7oj7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Coxsackievirus_A24 Coxsackievirus A24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OJ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OJ7 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oj7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oj7 OCA], [https://pdbe.org/7oj7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oj7 RCSB], [https://www.ebi.ac.uk/pdbsum/7oj7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oj7 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0H0:Carbohydrate+component+from+a+pentavalent+N-acetylneuraminic+acid+conjugate'>0H0</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oj7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oj7 OCA], [https://pdbe.org/7oj7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oj7 RCSB], [https://www.ebi.ac.uk/pdbsum/7oj7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oj7 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/V9VEF3_9ENTO V9VEF3_9ENTO] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Coxsackievirus A24 variant (CVA24v) is the primary causative agent of the highly contagious eye infection designated acute hemorrhagic conjunctivitis (AHC). It is solely responsible for two pandemics and several recurring outbreaks of the disease over the last decades, thus affecting millions of individuals throughout the world. To date, no antiviral agents or vaccines are available for combating this disease, and treatment is mainly supportive. CVA24v utilizes Neu5Ac-containing glycans as attachment receptors facilitating entry into host cells. We have previously reported that pentavalent Neu5Ac conjugates based on a glucose-scaffold inhibit CVA24v infection of human corneal epithelial cells. In this study, we report on the design and synthesis of scaffold-replaced pentavalent Neu5Ac conjugates and their effect on CVA24v cell transduction and the use of cryogenic electron microscopy (cryo-EM) to study the binding of these multivalent conjugates to CVA24v. The results presented here provide insights into the development of Neu5Ac-based inhibitors of CVA24v and, most significantly, the first application of cryo-EM to study the binding of a multivalent ligand to a lectin. | ||
| + | |||
| + | Exploring the Effect of Structure-Based Scaffold Hopping on the Inhibition of Coxsackievirus A24v Transduction by Pentavalent N-Acetylneuraminic Acid Conjugates.,Johansson E, Caraballo R, Hurdiss DL, Mistry N, Andersson CD, Thompson RF, Ranson NA, Zocher G, Stehle T, Arnberg N, Elofsson M Int J Mol Sci. 2021 Aug 5;22(16). pii: ijms22168418. doi: 10.3390/ijms22168418. PMID:34445134<ref>PMID:34445134</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7oj7" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Coxsackievirus A24]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Stehle T]] | [[Category: Stehle T]] | ||
[[Category: Zocher G]] | [[Category: Zocher G]] | ||
Current revision
Crystal structure of human coxsackievirus A24v in complex with a pentavalent N-acetylneuraminic acid conjugate
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