7oo9
From Proteopedia
(Difference between revisions)
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==Structure of Chloroflexus islandicus LOV domain C85A variant (CisFbFP)== | ==Structure of Chloroflexus islandicus LOV domain C85A variant (CisFbFP)== | ||
| - | <StructureSection load='7oo9' size='340' side='right'caption='[[7oo9]]' scene=''> | + | <StructureSection load='7oo9' size='340' side='right'caption='[[7oo9]], [[Resolution|resolution]] 1.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OO9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OO9 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7oo9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chloroflexus_islandicus Chloroflexus islandicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OO9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OO9 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oo9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oo9 OCA], [https://pdbe.org/7oo9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oo9 RCSB], [https://www.ebi.ac.uk/pdbsum/7oo9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oo9 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oo9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oo9 OCA], [https://pdbe.org/7oo9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oo9 RCSB], [https://www.ebi.ac.uk/pdbsum/7oo9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oo9 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A178LR65_9CHLR A0A178LR65_9CHLR] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | LOV domains are widespread photosensory modules that have also found applications in fluorescence microscopy, optogenetics, and light-driven generation of reactive oxygen species. Many of these applications require stable proteins with altered spectra. Here, we report a flavin-based fluorescent protein CisFbFP derived from Chloroflexus islandicus LOV domain-containing protein. We show that CisFbFP is thermostable, and its absorption and fluorescence spectra are red-shifted for approximately 6 nm, which has not been observed for other cysteine-substituted natural LOV domains. We also provide a crystallographic structure of CisFbFP at the resolution of 1.2 A that reveals alterations in the active site due to replacement of conservative asparagine with a serine. Finally, we discuss the possible effects of presence of cis-proline in the Abeta-Bbeta loop on the protein's structure and stability. The findings provide the basis for engineering and color tuning of LOV-based tools for molecular biology. | ||
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| + | High-resolution structure of a naturally red-shifted LOV domain.,Goncharov IM, Smolentseva A, Semenov O, Natarov I, Nazarenko VV, Yudenko A, Remeeva A, Gushchin I Biochem Biophys Res Commun. 2021 Jun 18;567:143-147. doi:, 10.1016/j.bbrc.2021.06.046. PMID:34153684<ref>PMID:34153684</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7oo9" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Chloroflexus islandicus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Goncharov IM]] | [[Category: Goncharov IM]] | ||
[[Category: Gushchin I]] | [[Category: Gushchin I]] | ||
[[Category: Remeeva A]] | [[Category: Remeeva A]] | ||
Current revision
Structure of Chloroflexus islandicus LOV domain C85A variant (CisFbFP)
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