This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1pwx
From Proteopedia
| Line 1: | Line 1: | ||
[[Image:1pwx.jpg|left|200px]] | [[Image:1pwx.jpg|left|200px]] | ||
| - | + | <!-- | |
| - | + | The line below this paragraph, containing "STRUCTURE_1pwx", creates the "Structure Box" on the page. | |
| - | + | You may change the PDB parameter (which sets the PDB file loaded into the applet) | |
| - | + | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), | |
| - | + | or leave the SCENE parameter empty for the default display. | |
| - | + | --> | |
| - | + | {{STRUCTURE_1pwx| PDB=1pwx | SCENE= }} | |
| - | + | ||
| - | + | ||
| - | }} | + | |
'''Crystal structure of the haloalcohol dehalogenase HheC complexed with bromide''' | '''Crystal structure of the haloalcohol dehalogenase HheC complexed with bromide''' | ||
| Line 32: | Line 29: | ||
[[Category: Tang, L.]] | [[Category: Tang, L.]] | ||
[[Category: Tiesinga, J J.W.]] | [[Category: Tiesinga, J J.W.]] | ||
| - | [[Category: | + | [[Category: Haloalcohol dehalogenase]] |
| - | [[Category: | + | [[Category: Halohydrin dehalogenase]] |
| - | [[Category: | + | [[Category: Halohydrin hydrogen-halide lyase]] |
| - | [[Category: | + | [[Category: Rossmann fold]] |
| - | [[Category: | + | [[Category: Sdr family]] |
| - | [[Category: | + | [[Category: Short-chain dehydrogenase/reductase]] |
| - | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 05:34:56 2008'' | |
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | |
Revision as of 02:34, 3 May 2008
Crystal structure of the haloalcohol dehalogenase HheC complexed with bromide
Overview
Haloalcohol dehalogenases are bacterial enzymes that catalyze the cofactor-independent dehalogenation of vicinal haloalcohols such as the genotoxic environmental pollutant 1,3-dichloro-2-propanol, thereby producing an epoxide, a chloride ion and a proton. Here we present X-ray structures of the haloalcohol dehalogenase HheC from Agrobacterium radiobacter AD1, and complexes of the enzyme with an epoxide product and chloride ion, and with a bound haloalcohol substrate mimic. These structures support a catalytic mechanism in which Tyr145 of a Ser-Tyr-Arg catalytic triad deprotonates the haloalcohol hydroxyl function to generate an intramolecular nucleophile that substitutes the vicinal halogen. Haloalcohol dehalogenases are related to the widespread family of NAD(P)H-dependent short-chain dehydrogenases/reductases (SDR family), which use a similar Ser-Tyr-Lys/Arg catalytic triad to catalyze reductive or oxidative conversions of various secondary alcohols and ketones. Our results reveal the first structural details of an SDR-related enzyme that catalyzes a substitutive dehalogenation reaction rather than a redox reaction, in which a halide-binding site is found at the location of the NAD(P)H binding site. Structure-based sequence analysis reveals that the various haloalcohol dehalogenases have likely originated from at least two different NAD-binding SDR precursors.
About this Structure
1PWX is a Single protein structure of sequence from Agrobacterium tumefaciens. Full crystallographic information is available from OCA.
Reference
Structure and mechanism of a bacterial haloalcohol dehalogenase: a new variation of the short-chain dehydrogenase/reductase fold without an NAD(P)H binding site., de Jong RM, Tiesinga JJ, Rozeboom HJ, Kalk KH, Tang L, Janssen DB, Dijkstra BW, EMBO J. 2003 Oct 1;22(19):4933-44. PMID:14517233 Page seeded by OCA on Sat May 3 05:34:56 2008
Categories: Agrobacterium tumefaciens | Single protein | Dijkstra, B W. | Janssen, D B. | Jong, R M.de. | Kalk, K H. | Rozeboom, H J. | Tang, L. | Tiesinga, J J.W. | Haloalcohol dehalogenase | Halohydrin dehalogenase | Halohydrin hydrogen-halide lyase | Rossmann fold | Sdr family | Short-chain dehydrogenase/reductase
