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2ynd

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Current revision (14:06, 1 February 2024) (edit) (undo)
 
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<StructureSection load='2ynd' size='340' side='right'caption='[[2ynd]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
<StructureSection load='2ynd' size='340' side='right'caption='[[2ynd]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2ynd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemamoeba_vivax Haemamoeba vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YND OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YND FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2ynd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YND OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YND FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=646:2,6-DICHLORO-4-(2-PIPERAZIN-1-YLPYRIDIN-4-YL)-N-(1,3,5-TRIMETHYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE'>646</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NHW:2-OXOPENTADECYL-COA'>NHW</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2ync|2ync]], [[4a95|4a95]], [[4b10|4b10]], [[4b11|4b11]], [[4b12|4b12]], [[4b13|4b13]], [[4b14|4b14]], [[4bbh|4bbh]], [[2yne|2yne]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=646:2,6-DICHLORO-4-(2-PIPERAZIN-1-YLPYRIDIN-4-YL)-N-(1,3,5-TRIMETHYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE'>646</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NHW:2-OXOPENTADECYL-COA'>NHW</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glycylpeptide_N-tetradecanoyltransferase Glycylpeptide N-tetradecanoyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.97 2.3.1.97] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ynd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynd OCA], [https://pdbe.org/2ynd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ynd RCSB], [https://www.ebi.ac.uk/pdbsum/2ynd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ynd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynd OCA], [https://pdbe.org/2ynd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ynd RCSB], [https://www.ebi.ac.uk/pdbsum/2ynd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/A5K1A2_PLAVS A5K1A2_PLAVS]] Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins (By similarity).[RuleBase:RU000586]
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[https://www.uniprot.org/uniprot/A5K1A2_PLAVS A5K1A2_PLAVS] Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins (By similarity).[RuleBase:RU000586]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Glycylpeptide N-tetradecanoyltransferase]]
 
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[[Category: Haemamoeba vivax]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bottrill, A R]]
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[[Category: Plasmodium vivax]]
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[[Category: Brannigan, J A]]
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[[Category: Bottrill AR]]
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[[Category: Broncel, M]]
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[[Category: Brannigan JA]]
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[[Category: Clough, B]]
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[[Category: Broncel M]]
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[[Category: Grainger, M]]
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[[Category: Clough B]]
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[[Category: Heal, W P]]
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[[Category: Grainger M]]
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[[Category: Holder, A A]]
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[[Category: Heal WP]]
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[[Category: Leatherbarrow, R J]]
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[[Category: Holder AA]]
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[[Category: Mann, D]]
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[[Category: Leatherbarrow RJ]]
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[[Category: Rackham, M D]]
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[[Category: Mann D]]
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[[Category: Serwa, R A]]
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[[Category: Rackham MD]]
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[[Category: Tate, E W]]
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[[Category: Serwa RA]]
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[[Category: Wilkinson, A J]]
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[[Category: Tate EW]]
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[[Category: Wright, M H]]
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[[Category: Wilkinson AJ]]
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[[Category: Malaria]]
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[[Category: Wright MH]]
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[[Category: Myristoylation]]
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[[Category: Pyrazole sulphonamide]]
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[[Category: Transferase]]
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Current revision

Plasmodium vivax N-myristoyltransferase in complex with a pyrazole sulphonamide inhibitor.

PDB ID 2ynd

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