1a8s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:28, 7 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1a8s' size='340' side='right'caption='[[1a8s]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='1a8s' size='340' side='right'caption='[[1a8s]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1a8s]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_fluorescens_liquefaciens"_flugge_1886 "bacillus fluorescens liquefaciens" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A8S OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1A8S FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1a8s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A8S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1A8S FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PPI:PROPANOIC+ACID'>PPI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CPOF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=294 "Bacillus fluorescens liquefaciens" Flugge 1886])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PPI:PROPANOIC+ACID'>PPI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Chloride_peroxidase Chloride peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.10 1.11.1.10] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1a8s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a8s OCA], [https://pdbe.org/1a8s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1a8s RCSB], [https://www.ebi.ac.uk/pdbsum/1a8s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1a8s ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1a8s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a8s OCA], [http://pdbe.org/1a8s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1a8s RCSB], [http://www.ebi.ac.uk/pdbsum/1a8s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1a8s ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PRXC_PSEFL PRXC_PSEFL]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 19: Line 20:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1a8s ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1a8s ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
The structures of cofactor-free haloperoxidases from Streptomyces aureofaciens, Streptomyces lividans, and Pseudomonas fluorescens have been determined at resolutions between 1.9 A and 1.5 A. The structures of two enzymes complexed with benzoate or propionate identify the binding site for the organic acids which are required for the haloperoxidase activity. Based on these complexes and on the structure of an inactive variant, a reaction mechanism is proposed for the halogenation reaction with peroxoacid and hypohalous acid as reaction intermediates. Comparison of the structures suggests that a specific halide binding site is absent in the enzymes but that hydrophobic organic compounds may fit into the active site pocket for halogenation at preferential sites.
 
- 
-
Structural investigation of the cofactor-free chloroperoxidases.,Hofmann B, Tolzer S, Pelletier I, Altenbuchner J, van Pee KH, Hecht HJ J Mol Biol. 1998 Jun 19;279(4):889-900. PMID:9642069<ref>PMID:9642069</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 1a8s" style="background-color:#fffaf0;"></div>
 
==See Also==
==See Also==
*[[Haloperoxidase|Haloperoxidase]]
*[[Haloperoxidase|Haloperoxidase]]
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus fluorescens liquefaciens flugge 1886]]
 
-
[[Category: Chloride peroxidase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Altenbuchner, J]]
+
[[Category: Pseudomonas fluorescens]]
-
[[Category: Hecht, H J]]
+
[[Category: Altenbuchner J]]
-
[[Category: Hofmann, B]]
+
[[Category: Hecht H-J]]
-
[[Category: Pee, K H.Van]]
+
[[Category: Hofmann B]]
-
[[Category: Pelletier, I]]
+
[[Category: Pelletier I]]
-
[[Category: Toelzer, S]]
+
[[Category: Toelzer S]]
-
[[Category: Haloperoxidase]]
+
[[Category: Van Pee K-H]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Propionate complex]]
+

Current revision

CHLOROPEROXIDASE F/PROPIONATE COMPLEX

PDB ID 1a8s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools