1anu
From Proteopedia
(Difference between revisions)
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<StructureSection load='1anu' size='340' side='right'caption='[[1anu]], [[Resolution|resolution]] 2.15Å' scene=''> | <StructureSection load='1anu' size='340' side='right'caption='[[1anu]], [[Resolution|resolution]] 2.15Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1anu]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ANU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ANU FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1anu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ANU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ANU FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1anu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1anu OCA], [https://pdbe.org/1anu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1anu RCSB], [https://www.ebi.ac.uk/pdbsum/1anu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1anu ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15Å</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1anu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1anu OCA], [https://pdbe.org/1anu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1anu RCSB], [https://www.ebi.ac.uk/pdbsum/1anu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1anu ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/CIPA_ACET2 CIPA_ACET2] Acts as a scaffolding protein in the cellulosome. It promotes binding of cellulose to the catalytic domains of the cellulolytic enzymes. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1anu ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1anu ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | BACKGROUND: The scaffoldin component of the cellulolytic bacterium Clostridium thermocellum is a non-hydrolytic protein which organizes the hydrolytic enzymes in a large complex, called the cellulosome. Scaffoldin comprises a series of functional domains, amongst which is a single cellulose-binding domain and nine cohesin domains which are responsible for integrating the individual enzymatic subunits into the complex. The cohesin domains are highly conserved in their primary amino acid sequences. These domains interact with a complementary domain, termed the dockerin domain, one of which is located on each enzymatic subunit. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The determination of structural information about the cohesin domain will provide insights into cellulosome assembly and activity. RESULTS: We have determined the three-dimensional crystal structure of one of the cohesin domains from C. thermocellum (cohesin 2) at 2.15 A resolution. The domain forms a nine-stranded beta sandwich with a jelly-roll topology, somewhat similar to the fold displayed by its neighboring cellulose-binding domain. CONCLUSIONS: The compact nature of the cohesin structure and its lack of a defined binding pocket suggests that binding between the cohesin and dockerin domains is characterized by interactions between exposed surface residues. As the cohesin-dockerin interaction appears to be rather nonselective, the binding face would presumably be characterized by surface residues which exhibit both intraspecies conservation and interspecies dissimilarity. Within the same species, unconserved surface residues may reflect the position of a given cohesin domain within the scaffoldin subunit, its orientation and interactions with neighboring domains. | ||
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- | A cohesin domain from Clostridium thermocellum: the crystal structure provides new insights into cellulosome assembly.,Shimon LJ, Bayer EA, Morag E, Lamed R, Yaron S, Shoham Y, Frolow F Structure. 1997 Mar 15;5(3):381-90. PMID:9083107<ref>PMID:9083107</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1anu" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Acetivibrio thermocellus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Bayer | + | [[Category: Bayer EA]] |
- | [[Category: Frolow | + | [[Category: Frolow F]] |
- | [[Category: Lamed | + | [[Category: Lamed R]] |
- | [[Category: Morag | + | [[Category: Morag E]] |
- | [[Category: Shimon | + | [[Category: Shimon LJW]] |
- | [[Category: Shoham | + | [[Category: Shoham Y]] |
- | [[Category: Yaron | + | [[Category: Yaron S]] |
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Current revision
COHESIN-2 DOMAIN OF THE CELLULOSOME FROM CLOSTRIDIUM THERMOCELLUM
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