1g1k
From Proteopedia
(Difference between revisions)
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<StructureSection load='1g1k' size='340' side='right'caption='[[1g1k]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='1g1k' size='340' side='right'caption='[[1g1k]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1g1k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1g1k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminiclostridium_cellulolyticum Ruminiclostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G1K FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1k OCA], [https://pdbe.org/1g1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g1k RCSB], [https://www.ebi.ac.uk/pdbsum/1g1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g1k ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1k OCA], [https://pdbe.org/1g1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g1k RCSB], [https://www.ebi.ac.uk/pdbsum/1g1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g1k ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q45996_9FIRM Q45996_9FIRM] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g1k ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g1k ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | In the assembly of the Clostridium cellulolyticum cellulosome, the multiple cohesin modules of the scaffolding protein CipC serve as receptors for cellulolytic enzymes which bear a dockerin module. The X-ray structure of a type I C. cellulolyticum cohesin module (Cc-cohesin) has been solved using molecular replacement, and refined at 2.0 A resolution. Despite a rather low sequence identity of 32 %, this module has a fold close to those of the two Clostridium thermocellum cohesin (Ct-cohesin) modules whose 3D structures have been determined previously. Cc-cohesin forms a dimer in the crystal, as do the two Ct-cohesins. We show here that the dimer exists in solution and that addition of dockerin-containing proteins dissociates the dimer. This suggests that the dimerization interface and the cohesin/dockerin interface may overlap. The nature of the overall surface and of the dimer interface of Cc-cohesin differ notably from those of the Ct-cohesin modules, being much less polar, and this may explain the species specificity observed in the cohesin/dockerin interaction of C. cellulolyticum and C. thermocellum. We have produced a topology model of a C. cellulolyticum dockerin and of a Cc-cohesin/dockerin complex using homology modeling and available biochemical data. Our model suggests that a special residue pair, already identified in dockerin sequences, is located at the center of the cohesin surface putatively interacting with the dockerin. | ||
| - | |||
| - | Crystal structure of a cohesin module from Clostridium cellulolyticum: implications for dockerin recognition.,Spinelli S, Fierobe HP, Belaich A, Belaich JP, Henrissat B, Cambillau C J Mol Biol. 2000 Nov 24;304(2):189-200. PMID:11080455<ref>PMID:11080455</ref> | ||
| - | |||
| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 1g1k" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Atcc 35319]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Belaich | + | [[Category: Ruminiclostridium cellulolyticum]] |
| - | [[Category: Belaich | + | [[Category: Belaich A]] |
| - | [[Category: Cambillau | + | [[Category: Belaich J-P]] |
| - | [[Category: Fierobe | + | [[Category: Cambillau C]] |
| - | [[Category: Henrissat | + | [[Category: Fierobe H-P]] |
| - | [[Category: Spinelli | + | [[Category: Henrissat B]] |
| - | + | [[Category: Spinelli S]] | |
| - | + | ||
Current revision
COHESIN MODULE FROM THE CELLULOSOME OF CLOSTRIDIUM CELLULOLYTICUM
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