2y6n
From Proteopedia
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y6n OCA], [https://pdbe.org/2y6n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y6n RCSB], [https://www.ebi.ac.uk/pdbsum/2y6n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y6n ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y6n OCA], [https://pdbe.org/2y6n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y6n RCSB], [https://www.ebi.ac.uk/pdbsum/2y6n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y6n ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Gramicidin is an apolar pentadecapeptide antibiotic consisting of alternating D-and L-amino acids. It functions, in part, by creating pores in membranes of susceptible cells rendering them leaky to monovalent cations. The peptide should be able to traverse the host membrane either as a double stranded, intertwined double helix (DSDH) or as a head-to-head single stranded helix (HHSH). Current structure models are based on macromolecular X-ray crystallography (MX) and nuclear magnetic resonance (NMR). However, the HHSH form has only been observed by NMR. The shape and size of the different gramicidin conformations differ. We speculated therefore that reconstituting it into a lipidic mesophase with bilayers of different microstructures would preferentially stabilize one form over the other. By using such mesophases for in meso crystallogenesis the expectation was that at least one would generate crystals of gramicidin in the HHSH form for structure determination by MX. This was tested using commercial and in-house synthesised lipids that support in meso crystallogenesis. Lipid acyl chain lengths were varied from 14 to 18 carbons to provide mesophases with a range of bilayer thicknesses. Unexpectedly, all lipids produced high quality, structure-grade crystals with gramicidin only in the DSDH conformation. | ||
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- | Membrane Protein Crystallization in Lipidic Mesophases. Hosting lipid affects on the crystallization and structure of a transmembrane peptide.,Hofer N, Aragao D, Lyons JA, Caffrey M Cryst Growth Des. 2011 Apr 6;11(4):1182-1192. Epub 2011 Feb 16. PMID:22933857<ref>PMID:22933857</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 2y6n" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Gramicidin|Gramicidin]] | *[[Gramicidin|Gramicidin]] | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> |
Revision as of 07:47, 7 February 2024
STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 8.8 MONOACYLGLYCEROL LIPID CUBIC PHASE.
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