1ymy

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Current revision (08:58, 14 February 2024) (edit) (undo)
 
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<StructureSection load='1ymy' size='340' side='right'caption='[[1ymy]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='1ymy' size='340' side='right'caption='[[1ymy]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1ymy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YMY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1YMY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1ymy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YMY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YMY FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nagA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acetylglucosamine-6-phosphate_deacetylase N-acetylglucosamine-6-phosphate deacetylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.25 3.5.1.25] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ymy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ymy OCA], [https://pdbe.org/1ymy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ymy RCSB], [https://www.ebi.ac.uk/pdbsum/1ymy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ymy ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1ymy TOPSAN]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1ymy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ymy OCA], [http://pdbe.org/1ymy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ymy RCSB], [http://www.ebi.ac.uk/pdbsum/1ymy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ymy ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1ymy TOPSAN]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/NAGA_ECOLI NAGA_ECOLI]] Catalyzes the deacetylation of N-acetyl-D-glucosamine-6-phosphate. In vitro, can also hydrolyze substrate analogs such as N-thioacetyl-D-glucosamine-6-phosphate, N-trifluoroacetyl-D-glucosamine-6-phosphate, N-acetyl-D-glucosamine-6-sulfate, N-acetyl-D-galactosamine-6-phosphate, and N-formyl-D-glucosamine-6-phosphate.<ref>PMID:17567047</ref>
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[https://www.uniprot.org/uniprot/NAGA_ECOLI NAGA_ECOLI] Catalyzes the deacetylation of N-acetyl-D-glucosamine-6-phosphate. In vitro, can also hydrolyze substrate analogs such as N-thioacetyl-D-glucosamine-6-phosphate, N-trifluoroacetyl-D-glucosamine-6-phosphate, N-acetyl-D-glucosamine-6-sulfate, N-acetyl-D-galactosamine-6-phosphate, and N-formyl-D-glucosamine-6-phosphate.<ref>PMID:17567047</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ecoli]]
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[[Category: Escherichia coli K-12]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: N-acetylglucosamine-6-phosphate deacetylase]]
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[[Category: Almo SC]]
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[[Category: Almo, S C]]
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[[Category: Burley SK]]
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[[Category: Burley, S K]]
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[[Category: Fedorov AA]]
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[[Category: Fedorov, A A]]
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[[Category: Fedorov EV]]
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[[Category: Fedorov, E V]]
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[[Category: Raushel FM]]
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[[Category: Structural genomic]]
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[[Category: Xiang DF]]
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[[Category: Raushel, F M]]
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[[Category: Xiang, D F]]
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[[Category: Hydrolase]]
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[[Category: Naga]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: PSI, Protein structure initiative]]
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Current revision

Crystal Structure of the N-Acetylglucosamine-6-phosphate deacetylase from Escherichia coli K12

PDB ID 1ymy

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