1qd0

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[[Image:1qd0.gif|left|200px]]
[[Image:1qd0.gif|left|200px]]
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{{Structure
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|PDB= 1qd0 |SIZE=350|CAPTION= <scene name='initialview01'>1qd0</scene>, resolution 2.50&Aring;
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The line below this paragraph, containing "STRUCTURE_1qd0", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=RR6:3-HYDROXY-7-(4-{1-[2-HYDROXY-3-(2-HYDROXY-5-SULFO-PHENYLAZO)-BENZYL]-2-SULFO-ETHYLAMINO}-[1,2,5]TRIAZIN-2-YLAMINO)-2-(2-HYDROXY-5-SULFO-PHENYLAZO)-NAPTHALENE-1,8-DISULFONIC+ACID'>RR6</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1qd0| PDB=1qd0 | SCENE= }}
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|RELATEDENTRY=[[1hcv|1HCV]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qd0 OCA], [http://www.ebi.ac.uk/pdbsum/1qd0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1qd0 RCSB]</span>
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}}
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'''CAMELID HEAVY CHAIN VARIABLE DOMAINS PROVIDE EFFICIENT COMBINING SITES TO HAPTENS'''
'''CAMELID HEAVY CHAIN VARIABLE DOMAINS PROVIDE EFFICIENT COMBINING SITES TO HAPTENS'''
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[[Category: Tegoni, M.]]
[[Category: Tegoni, M.]]
[[Category: Verrips, T.]]
[[Category: Verrips, T.]]
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[[Category: azo-dye]]
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[[Category: Azo-dye]]
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[[Category: camelid vh]]
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[[Category: Camelid vh]]
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[[Category: immune system]]
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[[Category: Immune system]]
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[[Category: immunoglobulin fragment]]
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[[Category: Immunoglobulin fragment]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 06:08:48 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:12:01 2008''
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Revision as of 03:08, 3 May 2008

Template:STRUCTURE 1qd0

CAMELID HEAVY CHAIN VARIABLE DOMAINS PROVIDE EFFICIENT COMBINING SITES TO HAPTENS


Overview

Camelids can produce antibodies devoid of light chains and CH1 domains (Hamers-Casterman, C. et al. (1993) Nature 363, 446-448). Camelid heavy-chain variable domains (VHH) have high affinities for protein antigens and the structures of two of these complexes have been determined (Desmyter, A. et al. (1996) Nature Struc. Biol. 3, 803-811; Decanniere, K. et al. (1999) Structure 7, 361-370). However, the small size of these VHHs and their monomeric nature bring into question their capacity to bind haptens. Here, we have successfully raised llama antibodies against the hapten azo-dye Reactive Red (RR6) and determined the crystal structure of the complex between a dimer of this hapten and a VHH fragment. The surface of interaction between the VHH and the dimeric hapten is large, with an area of ca. 300 A(2); this correlates well with the low-dissociation constant of 22 nM measured for the monomer. The VHH fragment provides an efficient combining site to the RR6, using its three CDR loops. In particular, CDR1 provides a strong interaction to the hapten through two histidine residues bound to its copper atoms. VHH fragments might, therefore, prove to be valuable tools for selecting, removing, or capturing haptens. They are likely to play a role in biotechnology extending beyond protein recognition alone.

About this Structure

1QD0 is a Single protein structure of sequence from Lama glama. Full crystallographic information is available from OCA.

Reference

Camelid heavy-chain variable domains provide efficient combining sites to haptens., Spinelli S, Frenken LG, Hermans P, Verrips T, Brown K, Tegoni M, Cambillau C, Biochemistry. 2000 Feb 15;39(6):1217-22. PMID:10684599 Page seeded by OCA on Sat May 3 06:08:48 2008

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