2imr
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure of amidohydrolase DR_0824 from Deinococcus radiodurans== | ==Crystal structure of amidohydrolase DR_0824 from Deinococcus radiodurans== | ||
| - | <StructureSection load='2imr' size='340' side='right'caption='[[2imr]]' scene=''> | + | <StructureSection load='2imr' size='340' side='right'caption='[[2imr]], [[Resolution|resolution]] 1.78Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IMR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IMR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2imr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IMR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IMR FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2imr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2imr OCA], [https://pdbe.org/2imr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2imr RCSB], [https://www.ebi.ac.uk/pdbsum/2imr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2imr ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2imr TOPSAN]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2imr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2imr OCA], [https://pdbe.org/2imr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2imr RCSB], [https://www.ebi.ac.uk/pdbsum/2imr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2imr ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2imr TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/MQNX_DEIRA MQNX_DEIRA] Catalyzes the deamination of aminodeoxyfutalosine (AFL) into futalosine (FL). To a lesser extent, can also deaminate 5'-deoxyadenosine, 5'-methylthioadenosine, 2'-deoxyadenosine, adenosine, 1-(6-amino-9H-purin-9-yl)-1-deoxy-N-ethyl-beta-D-ribofuranuronamide (NECA), and S-adenosylhomocysteine.<ref>PMID:23972005</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 16: | Line 20: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2imr ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2imr ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Deinococcus radiodurans]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Burley SK]] | [[Category: Burley SK]] | ||
[[Category: Eswaramoorthy S]] | [[Category: Eswaramoorthy S]] | ||
[[Category: Swaminathan S]] | [[Category: Swaminathan S]] | ||
Current revision
Crystal structure of amidohydrolase DR_0824 from Deinococcus radiodurans
| |||||||||||
