3bxk

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Current revision (09:31, 21 February 2024) (edit) (undo)
 
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<StructureSection load='3bxk' size='340' side='right'caption='[[3bxk]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
<StructureSection load='3bxk' size='340' side='right'caption='[[3bxk]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3bxk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BXK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BXK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3bxk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BXK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BXK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3bxl|3bxl]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Calm1, Calm, Cam, Cam1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bxk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bxk OCA], [https://pdbe.org/3bxk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bxk RCSB], [https://www.ebi.ac.uk/pdbsum/3bxk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bxk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bxk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bxk OCA], [https://pdbe.org/3bxk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bxk RCSB], [https://www.ebi.ac.uk/pdbsum/3bxk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bxk ProSAT]</span></td></tr>
</table>
</table>
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== Disease ==
 
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[[https://www.uniprot.org/uniprot/CAC1A_HUMAN CAC1A_HUMAN]] Defects in CACNA1A are the cause of spinocerebellar ataxia type 6 (SCA6) [MIM:[https://omim.org/entry/183086 183086]]. Spinocerebellar ataxia is a clinically and genetically heterogeneous group of cerebellar disorders. Patients show progressive incoordination of gait and often poor coordination of hands, speech and eye movements, due to degeneration of the cerebellum with variable involvement of the brainstem and spinal cord. SCA6 is mainly caused by expansion of a CAG repeat in the coding region of CACNA1A. There seems to be a correlation between the repeat number and earlier onset of the disorder.<ref>PMID:8988170</ref> <ref>PMID:9345107</ref> <ref>PMID:9302278</ref> <ref>PMID:16325861</ref> <ref>PMID:20682717</ref> Defects in CACNA1A are the cause of familial hemiplegic migraine type 1 (FHM1) [MIM:[https://omim.org/entry/141500 141500]]; also known as migraine familial hemiplegic 1 (MHP1). FHM1, a rare autosomal dominant subtype of migraine with aura, is associated with ictal hemiparesis and, in some families, progressive cerebellar atrophy.<ref>PMID:8898206</ref> <ref>PMID:10408532</ref> <ref>PMID:11409427</ref> <ref>PMID:11439943</ref> <ref>PMID:15032980</ref> <ref>PMID:18400034</ref> Defects in CACNA1A are the cause of episodic ataxia type 2 (EA2) [MIM:[https://omim.org/entry/108500 108500]]; also known as acetazolamide-responsive hereditary paroxysmal cerebellar ataxia (APCA). EA2 is an autosomal dominant disorder characterized by acetozolamide-responsive attacks of ataxia, migraine-like symptoms, interictal nystagmus, and cerebellar atrophy.<ref>PMID:9302278</ref> <ref>PMID:8898206</ref> <ref>PMID:10987655</ref> <ref>PMID:11176968</ref> <ref>PMID:11723274</ref> <ref>PMID:12420090</ref> <ref>PMID:15293273</ref> <ref>PMID:15173248</ref> <ref>PMID:14718690</ref> <ref>PMID:18602318</ref> <ref>PMID:19232643</ref> <ref>PMID:20129625</ref> <ref>PMID:21696515</ref>
 
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/CAC1A_HUMAN CAC1A_HUMAN]] Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1A gives rise to P and/or Q-type calcium currents. P/Q-type calcium channels belong to the 'high-voltage activated' (HVA) group and are blocked by the funnel toxin (Ftx) and by the omega-agatoxin-IVA (omega-Aga-IVA). They are however insensitive to dihydropyridines (DHP), and omega-conotoxin-GVIA (omega-CTx-GVIA).
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[https://www.uniprot.org/uniprot/CALM1_RAT CALM1_RAT] Calmodulin mediates the control of a large number of enzymes, ion channels, aquaporins and other proteins through calcium-binding. Among the enzymes to be stimulated by the calmodulin-calcium complex are a number of protein kinases and phosphatases. Together with CCP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis. Mediates calcium-dependent inactivation of CACNA1C. Positively regulates calcium-activated potassium channel activity of KCNN2.[UniProtKB:P62158]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
*[[Calmodulin 3D structures|Calmodulin 3D structures]]
*[[Calmodulin 3D structures|Calmodulin 3D structures]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Buffalo rat]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Kooi, C W.Vander]]
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[[Category: Rattus norvegicus]]
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[[Category: Leahy, D J]]
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[[Category: Leahy DJ]]
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[[Category: Mori, M X]]
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[[Category: Mori MX]]
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[[Category: Yue, D T]]
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[[Category: Vander Kooi CW]]
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[[Category: Acetylation]]
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[[Category: Yue DT]]
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[[Category: Calcium channel]]
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[[Category: Calcium transport]]
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[[Category: Calcium-dependent]]
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[[Category: Calmodulin]]
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[[Category: Facillitation]]
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[[Category: Glycoprotein]]
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[[Category: Inactivation]]
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[[Category: Ion channel]]
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[[Category: Ion transport]]
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[[Category: Ionic channel]]
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[[Category: Iq domain]]
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[[Category: Membrane]]
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[[Category: Membrane protein]]
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[[Category: Methylation]]
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[[Category: Phosphoprotein]]
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[[Category: Robetta]]
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[[Category: Signaling protein]]
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[[Category: Simulation]]
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[[Category: Transmembrane]]
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[[Category: Transport]]
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[[Category: Voltage-gated]]
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[[Category: Voltage-gated channel]]
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Current revision

Crystal structure of the P/Q-type calcium channel (CaV2.1) IQ domain and CA2+calmodulin complex

PDB ID 3bxk

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