3bzr

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Current revision (09:32, 21 February 2024) (edit) (undo)
 
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<StructureSection load='3bzr' size='340' side='right'caption='[[3bzr]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='3bzr' size='340' side='right'caption='[[3bzr]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3bzr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BZR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BZR FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3bzr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BZR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BZR FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3bzl|3bzl]], [[3bzo|3bzo]], [[3bzp|3bzp]], [[3bzs|3bzs]], [[3bzt|3bzt]], [[3bzv|3bzv]], [[3bzx|3bzx]], [[3bzy|3bzy]], [[3bzz|3bzz]], [[3c00|3c00]], [[3c01|3c01]], [[3c03|3c03]]</div></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.646&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">escU ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bzr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bzr OCA], [https://pdbe.org/3bzr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bzr RCSB], [https://www.ebi.ac.uk/pdbsum/3bzr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bzr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bzr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bzr OCA], [https://pdbe.org/3bzr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bzr RCSB], [https://www.ebi.ac.uk/pdbsum/3bzr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bzr ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9AJ26_ECOLX Q9AJ26_ECOLX]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bzr ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bzr ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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During infection by Gram-negative pathogenic bacteria, the type III secretion system (T3SS) is assembled to allow for the direct transmission of bacterial virulence effectors into the host cell. The T3SS system is characterized by a series of prominent multi-component rings in the inner and outer bacterial membranes, as well as a translocation pore in the host cell membrane. These are all connected by a series of polymerized tubes that act as the direct conduit for the T3SS proteins to pass through to the host cell. During assembly of the T3SS, as well as the evolutionarily related flagellar apparatus, a post-translational cleavage event within the inner membrane proteins EscU/FlhB is required to promote a secretion-competent state. These proteins have long been proposed to act as a part of a molecular switch, which would regulate the appropriate chronological secretion of the various T3SS apparatus components during assembly and subsequently the transported virulence effectors. Here we show that a surface type II beta-turn in the Escherichia coli protein EscU undergoes auto-cleavage by a mechanism involving cyclization of a strictly conserved asparagine residue. Structural and in vivo analysis of point and deletion mutations illustrates the subtle conformational effects of auto-cleavage in modulating the molecular features of a highly conserved surface region of EscU, a potential point of interaction with other T3SS components at the inner membrane. In addition, this work provides new structural insight into the distinct conformational requirements for a large class of self-cleaving reactions involving asparagine cyclization.
 
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Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.,Zarivach R, Deng W, Vuckovic M, Felise HB, Nguyen HV, Miller SI, Finlay BB, Strynadka NC Nature. 2008 May 1;453(7191):124-7. PMID:18451864<ref>PMID:18451864</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 3bzr" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus coli migula 1895]]
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[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Deng, W]]
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[[Category: Deng W]]
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[[Category: Felise, H B]]
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[[Category: Felise HB]]
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[[Category: Finlay, B B]]
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[[Category: Finlay BB]]
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[[Category: Miller, S I]]
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[[Category: Miller SI]]
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[[Category: Nguyen, H V]]
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[[Category: Nguyen HV]]
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[[Category: Strynadka, N C.J]]
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[[Category: Strynadka NCJ]]
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[[Category: Vuckovic, M]]
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[[Category: Vuckovic M]]
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[[Category: Zarivach, R]]
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[[Category: Zarivach R]]
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[[Category: Asparagine cyclyzation]]
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[[Category: Auto cleavage protein]]
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[[Category: Intein]]
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[[Category: Membrane]]
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[[Category: Membrane protein]]
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[[Category: Protein transport]]
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Current revision

Crystal structure of EscU C-terminal domain with N262D mutation, Space group P 41 21 2

PDB ID 3bzr

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