3fvq

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Current revision (09:51, 21 February 2024) (edit) (undo)
 
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<StructureSection load='3fvq' size='340' side='right'caption='[[3fvq]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3fvq' size='340' side='right'caption='[[3fvq]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3fvq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neig1 Neig1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FVQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FVQ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3fvq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_FA_1090 Neisseria gonorrhoeae FA 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FVQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FVQ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fbpC, NGO0215 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242231 NEIG1])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Fe(3+)-transporting_ATPase Fe(3+)-transporting ATPase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.30 3.6.3.30] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fvq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fvq OCA], [https://pdbe.org/3fvq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fvq RCSB], [https://www.ebi.ac.uk/pdbsum/3fvq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fvq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fvq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fvq OCA], [https://pdbe.org/3fvq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fvq RCSB], [https://www.ebi.ac.uk/pdbsum/3fvq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fvq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/FBPC_NEIG1 FBPC_NEIG1]] Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system (By similarity).
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[https://www.uniprot.org/uniprot/FBPC_NEIG1 FBPC_NEIG1] Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fvq ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fvq ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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The mechanism by which nucleotide-binding domains (NBDs) of ABC transporters power the transport of substrates across cell membranes is currently unclear. Here we report the crystal structure of an NBD, FbpC, from the Neisseria gonorrhoeae ferric iron uptake transporter with an unusual and substantial domain swap in the C-terminal regulatory domain. This entanglement suggests that FbpC is unable to open to the same extent as the homologous protein MalK. Using molecular dynamics we demonstrate that this is not the case: both NBDs open rapidly once ATP is removed. We conclude from this result that the closed structures of FbpC and MalK have higher free energies than their respective open states. This result has important implications for our understanding of the mechanism of power generation in ABC transporters, because the unwinding of this free energy ensures that the opening of these two NBDs is also powered.
 
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Insights into how nucleotide-binding domains power ABC transport.,Newstead S, Fowler PW, Bilton P, Carpenter EP, Sadler PJ, Campopiano DJ, Sansom MS, Iwata S Structure. 2009 Sep 9;17(9):1213-22. PMID:19748342<ref>PMID:19748342</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 3fvq" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Neig1]]
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[[Category: Neisseria gonorrhoeae FA 1090]]
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[[Category: Bilton, P]]
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[[Category: Bilton P]]
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[[Category: Campopiano, D]]
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[[Category: Campopiano D]]
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[[Category: Carpenter, E P]]
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[[Category: Carpenter EP]]
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[[Category: Iwata, S]]
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[[Category: Iwata S]]
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[[Category: Newstead, S]]
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[[Category: Newstead S]]
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[[Category: Abc motor domain]]
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[[Category: Atp-binding]]
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[[Category: Cell inner membrane]]
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[[Category: Cell membrane]]
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[[Category: Ferric iron transport]]
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[[Category: Hydrolase]]
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[[Category: Ion transport]]
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[[Category: Iron]]
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[[Category: Iron transport]]
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[[Category: Membrane]]
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[[Category: Nucleotide binding domain]]
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[[Category: Nucleotide-binding]]
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[[Category: Transport]]
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Current revision

Crystal structure of the nucleotide binding domain FbpC complexed with ATP

PDB ID 3fvq

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