3i57

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Current revision (10:03, 21 February 2024) (edit) (undo)
 
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<StructureSection load='3i57' size='340' side='right'caption='[[3i57]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3i57' size='340' side='right'caption='[[3i57]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3i57]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_23272 Atcc 23272]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I57 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3i57]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Limosilactobacillus_reuteri Limosilactobacillus reuteri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I57 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mub ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1598 ATCC 23272])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i57 OCA], [https://pdbe.org/3i57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i57 RCSB], [https://www.ebi.ac.uk/pdbsum/3i57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i57 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i57 OCA], [https://pdbe.org/3i57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i57 RCSB], [https://www.ebi.ac.uk/pdbsum/3i57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i57 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9RGN5_LIMRT Q9RGN5_LIMRT]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i57 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i57 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Lactobacillus reuteri mucus-binding protein (MUB) is a cell-surface protein that is involved in bacterial interaction with mucus and colonization of the digestive tract. The 353-kDa mature protein is representative of a broadly important class of adhesins that have remained relatively poorly characterized due to their large size and highly modular nature. MUB contains two different types of repeats (Mub1 and Mub2) present in six and eight copies, respectively, and shown to be responsible for the adherence to intestinal mucus. Here we report the 1.8-A resolution crystal structure of a type 2 Mub repeat (184 amino acids) comprising two structurally related domains resembling the functional repeat found in a family of immunoglobulin (Ig)-binding proteins. The N-terminal domain bears striking structural similarity to the repeat unit of Protein L (PpL) from Peptostreptococcus magnus, suggesting binding in a non-immune Fab-dependent manner. A distorted PpL-like fold is also seen in the C-terminal domain. As with PpL, Mub repeats were able to interact in vitro with a large repertoire of mammalian Igs, including secretory IgA. This hitherto undetected activity is consistent with the current model that antibody responses against commensal flora are of broad specificity and low affinity.
 
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Crystal structure of a mucus-binding protein repeat reveals an unexpected functional immunoglobulin binding activity.,MacKenzie DA, Tailford LE, Hemmings AM, Juge N J Biol Chem. 2009 Nov 20;284(47):32444-53. Epub 2009 Sep 16. PMID:19758995<ref>PMID:19758995</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 3i57" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 23272]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Hemmings, A M]]
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[[Category: Limosilactobacillus reuteri]]
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[[Category: Juge, N]]
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[[Category: Hemmings AM]]
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[[Category: MacKenzie, D A]]
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[[Category: Juge N]]
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[[Category: Tailford, L E]]
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[[Category: MacKenzie DA]]
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[[Category: Beta grasp fold]]
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[[Category: Tailford LE]]
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[[Category: Cell wall]]
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[[Category: Peptidoglycan-anchor]]
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[[Category: Protein binding]]
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Current revision

Type 2 repeat of the mucus binding protein MUB from Lactobacillus reuteri

PDB ID 3i57

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