3q3h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:45, 21 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3q3h' size='340' side='right'caption='[[3q3h]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
<StructureSection load='3q3h' size='340' side='right'caption='[[3q3h]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3q3h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinobacillus_pleuropneumoniae_4074 Actinobacillus pleuropneumoniae 4074]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q3H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q3H FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3q3h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinobacillus_pleuropneumoniae_serovar_1_str._4074 Actinobacillus pleuropneumoniae serovar 1 str. 4074]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q3H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q3H FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3q3e|3q3e]], [[3q3i|3q3i]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">APL_1635, appser1_17560 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=228399 Actinobacillus pleuropneumoniae 4074])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q3h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q3h OCA], [https://pdbe.org/3q3h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q3h RCSB], [https://www.ebi.ac.uk/pdbsum/3q3h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q3h ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q3h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q3h OCA], [https://pdbe.org/3q3h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q3h RCSB], [https://www.ebi.ac.uk/pdbsum/3q3h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q3h ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Glycosylation of proteins is a fundamental process that influences protein function. The Haemophilus influenzae HMW1 adhesin is an N-linked glycoprotein that mediates adherence to respiratory epithelium, an essential early step in the pathogenesis of H. influenzae disease. HMW1 is glycosylated by HMW1C, a novel glycosyltransferase in the GT41 family that creates N-glycosidic linkages with glucose and galactose at asparagine residues and di-glucose linkages at sites of glucose modification. Here we report the crystal structure of Actinobacillus pleuropneumoniae HMW1C (ApHMW1C), a functional homolog of HMW1C. The structure of ApHMW1C contains an N-terminal all alpha-domain (AAD) fold and a C-terminal GT-B fold with two Rossmann-like domains and lacks the tetratricopeptide repeat fold characteristic of human GlcNAc transferase and other members of the GT41 family. The GT-B fold harbors the binding site for UDP-hexose, and the interface of the AAD fold and the GT-B fold forms a unique groove with potential to accommodate the acceptor protein. Structure-based functional analyses demonstrated that the HMW1C protein shares the same structure as ApHMW1C and provided insights into the unique bi-functional activity of HMW1C and ApHMW1C, suggesting an explanation for the similarities and differences of the HMW1C-like proteins compared to other GT41 family members.
 
- 
-
Structural insights into the glycosyltransferase activity of the Actinobacillus pleuropneumoniae HMW1C-like protein.,Kawai F, Grass S, Kim Y, Choi KJ, St Geme JW, Yeo HJ J Biol Chem. 2011 Sep 9. PMID:21908603<ref>PMID:21908603</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 3q3h" style="background-color:#fffaf0;"></div>
 
==See Also==
==See Also==
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Actinobacillus pleuropneumoniae 4074]]
+
[[Category: Actinobacillus pleuropneumoniae serovar 1 str. 4074]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Kawai, F]]
+
[[Category: Kawai F]]
-
[[Category: Yeo, H J]]
+
[[Category: Yeo HJ]]
-
[[Category: Hmw1]]
+
-
[[Category: Hmw1c]]
+
-
[[Category: N-glycosylation]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of the Actinobacillus pleuropneumoniae HMW1C glycosyltransferase in complex with UDP-GLC

PDB ID 3q3h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools