4hsr
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4hsr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas Pseudomonas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HSR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HSR FirstGlance]. <br> | <table><tr><td colspan='2'>[[4hsr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas Pseudomonas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HSR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HSR FirstGlance]. <br> | ||
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLJ:5,5-DIHYDROXY-L-NORVALINE'>GLJ</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.13Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLJ:5,5-DIHYDROXY-L-NORVALINE'>GLJ</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hsr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hsr OCA], [https://pdbe.org/4hsr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hsr RCSB], [https://www.ebi.ac.uk/pdbsum/4hsr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hsr ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hsr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hsr OCA], [https://pdbe.org/4hsr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hsr RCSB], [https://www.ebi.ac.uk/pdbsum/4hsr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hsr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The crystal structure of wild-type form of glutaryl-7-ACA acylase from Pseudomonas N176 and a double mutant of the protein (His57betaSer/His70betaSer) that displays enhanced catalytic efficiency on cephalosporin C over glutaryl-7-aminocephalosporanic acid has been determined. The structures show a heterodimer made up of an alpha chain (229 residues) and a beta chain (543 residues) with a deep cavity, which constitutes the active site. Comparison of the wild-type and mutant structures provide insights into the molecular reasons for the observed enhanced specificity on cephalosporin C over glutaryl-7-aminocephalosporanic acid and offered the basis to evolve a further improve enzyme variant. The nucleophilic catalytic serine residue, Ser1beta, is situated at the base of the active site cavity. The electron density reveals a ligand covalently bound to the catalytic serine residue such that a tetrahedral adduct is formed. This is proposed to mimic the transition state of the enzyme for both the maturation step and the catalysis of the substrates. A view of the transitions state configuration of the enzyme provides important insights into the mechanism of substrate binding and catalysis. | ||
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- | Structure of a class III engineered cephalosporin acylase. Comparisons to class I acylase and implications for differences in substrate specificity and catalytic activity.,Golden E, Paterson R, Tie WJ, Anandan A, Flematti G, Molla G, Rosini E, Pollegioni L, Vrielink A Biochem J. 2013 Feb 4. PMID:23373797<ref>PMID:23373797</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 4hsr" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Cephalosporin acylase 3D structures|Cephalosporin acylase 3D structures]] | *[[Cephalosporin acylase 3D structures|Cephalosporin acylase 3D structures]] | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> |
Current revision
Crystal Structure of a class III engineered cephalosporin acylase
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Categories: Large Structures | Pseudomonas | Anandan A | Flematti G | Golden E | Molla G | Patterson R | Pollegioni L | Rosini E | Tie WJ | Vrielink A