5ua4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:25, 6 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5ua4' size='340' side='right'caption='[[5ua4]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='5ua4' size='340' side='right'caption='[[5ua4]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ua4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Asf Asf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UA4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UA4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ua4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/African_swine_fever_virus African swine fever virus] and [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UA4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UA4 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ua5|5ua5]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">5-HL, A179L ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10497 ASF])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ua4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ua4 OCA], [https://pdbe.org/5ua4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ua4 RCSB], [https://www.ebi.ac.uk/pdbsum/5ua4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ua4 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ua4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ua4 OCA], [http://pdbe.org/5ua4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ua4 RCSB], [http://www.ebi.ac.uk/pdbsum/5ua4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ua4 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BID_PIG BID_PIG]] Induces caspases and apoptosis. Counters the protective effect of Bcl-2 (By similarity).
+
[https://www.uniprot.org/uniprot/ARBH_ASFB7 ARBH_ASFB7] Suppresses apoptosis in host cell and thus facilitates production of progeny virions (PubMed:9123849, PubMed:18329683). Has the ability to potentially bind to all the members of the proapoptotic Bcl-2 family (PubMed:28053104, PubMed:18329683).<ref>PMID:18329683</ref> <ref>PMID:28053104</ref> <ref>PMID:9123849</ref>
-
<div style="background-color:#fffaf0;">
+
-
== Publication Abstract from PubMed ==
+
-
Programmed cell death is a tightly controlled process critical for the removal of damaged or infected cells. Pro- and anti-apoptotic proteins of the Bcl-2 family are pivotal mediators of this process. African Swine Fever virus (ASFV) is a large DNA virus, the only member of the Asfarviridae family, and harbors A179L, a putative Bcl-2 like protein. A179L has been shown to bind to several pro-apoptotic Bcl-2 proteins, however the hierarchy of binding and the structural basis for apoptosis inhibition are currently not understood. We systematically evaluated the ability of A179L to bind pro-apoptotic Bcl-2 family members, and show that A179L is the first anti-apoptotic Bcl-2 protein to bind to all major death inducing mammalian Bcl-2 proteins. We then defined the structural basis for apoptosis inhibition of A179L by determining crystal structures of A179L bound to both Bid and Bax BH3 motifs. Our findings provide a mechanistic understanding for the potent anti-apoptotic activity of A179L by identifying it as the first pan pro-death Bcl-2 binder, and serve as a platform for more detailed investigations into the role of A179L during ASFV infection. IMPORTANCE: Numerous viruses have acquired strategies to subvert apoptosis by encoding proteins capable of sequestering pro-apoptotic host proteins. African Swine Fever virus (ASFV), a large DNA virus and the only member of the Asfarviridae family, encodes the protein A179L that functions to prevent apoptosis. We show that A179L is unusual amongst anti-apoptotic Bcl-2 proteins in being able to physically bind to all core death inducing mammalian Bcl-2 proteins. Currently, little is known regarding the molecular interactions between A179L and the pro-apoptotic Bcl-2 members. Using crystal structures of A179L bound to two of the identified pro-apoptotic Bcl-2 proteins, Bid and Bax, we now provide a 3D view of how A179L sequesters host pro-apoptotic proteins, which is crucial for subverting premature host cell apoptosis.
+
-
 
+
-
Structural insight into African Swine Fever virus A179L mediated inhibition of apoptosis.,Banjara S, Caria S, Dixon LK, Hinds MG, Kvansakul M J Virol. 2017 Jan 4. pii: JVI.02228-16. doi: 10.1128/JVI.02228-16. PMID:28053104<ref>PMID:28053104</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 5ua4" style="background-color:#fffaf0;"></div>
+
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Asf]]
+
[[Category: African swine fever virus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Banjara, S]]
+
[[Category: Sus scrofa]]
-
[[Category: Caria, S]]
+
[[Category: Banjara S]]
-
[[Category: Kvansakul, M]]
+
[[Category: Caria S]]
-
[[Category: Apoptosis]]
+
[[Category: Kvansakul M]]
-
[[Category: Bcl-2]]
+

Current revision

Crystal structure of A179L:Bid BH3 complex

PDB ID 5ua4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools