6w2r

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Current revision (14:41, 6 March 2024) (edit) (undo)
 
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<StructureSection load='6w2r' size='340' side='right'caption='[[6w2r]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
<StructureSection load='6w2r' size='340' side='right'caption='[[6w2r]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6w2r]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Synthetic_construct_sequences Synthetic construct sequences]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6W2R OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6W2R FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6w2r]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6W2R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6W2R FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6w2q|6w2q]]</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.344&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6w2r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6w2r OCA], [http://pdbe.org/6w2r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6w2r RCSB], [http://www.ebi.ac.uk/pdbsum/6w2r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6w2r ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6w2r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6w2r OCA], [https://pdbe.org/6w2r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6w2r RCSB], [https://www.ebi.ac.uk/pdbsum/6w2r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6w2r ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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The ability to precisely design large proteins with diverse shapes would enable applications ranging from the design of protein binders that wrap around their target to the positioning of multiple functional sites in specified orientations. We describe a protein backbone design method for generating a wide range of rigid fusions between helix-containing proteins and use it to design 75,000 structurally unique junctions between monomeric and homo-oligomeric de novo designed and ankyrin repeat proteins (RPs). Of the junction designs that were experimentally characterized, 82% have circular dichroism and solution small-angle X-ray scattering profiles consistent with the design models and are stable at 95 degrees C. Crystal structures of four designed junctions were in close agreement with the design models with rmsds ranging from 0.9 to 1.6 A. Electron microscopic images of extended tetrameric structures and approximately 10-nm-diameter "L" and "V" shapes generated using the junctions are close to the design models, demonstrating the control the rigid junctions provide for protein shape sculpting over multiple nanometer length scales.
 
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Modular repeat protein sculpting using rigid helical junctions.,Brunette TJ, Bick MJ, Hansen JM, Chow CM, Kollman JM, Baker D Proc Natl Acad Sci U S A. 2020 Apr 3. pii: 1908768117. doi:, 10.1073/pnas.1908768117. PMID:32245816<ref>PMID:32245816</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 6w2r" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Synthetic construct sequences]]
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[[Category: Synthetic construct]]
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[[Category: Baker, D]]
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[[Category: Baker D]]
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[[Category: Bick, M J]]
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[[Category: Bick MJ]]
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[[Category: Brunette, T J]]
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[[Category: Brunette TJ]]
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[[Category: Biosynthetic protein]]
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[[Category: Computational design]]
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[[Category: Designed helical repeat]]
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[[Category: Helical bundle]]
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Current revision

Junction 19, DHR54-DHR79

PDB ID 6w2r

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