7lhl
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
<StructureSection load='7lhl' size='340' side='right'caption='[[7lhl]], [[Resolution|resolution]] 3.60Å' scene=''> | <StructureSection load='7lhl' size='340' side='right'caption='[[7lhl]], [[Resolution|resolution]] 3.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[7lhl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[7lhl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis Mycolicibacterium smegmatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LHL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LHL FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.6Å</td></tr> |
- | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lhl OCA], [https://pdbe.org/7lhl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lhl RCSB], [https://www.ebi.ac.uk/pdbsum/7lhl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lhl ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lhl OCA], [https://pdbe.org/7lhl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lhl RCSB], [https://www.ebi.ac.uk/pdbsum/7lhl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lhl ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Mycobacterium smegmatis Lhr (MsmLhr; 1507-aa) is the founder of a novel clade of bacterial helicases. MsmLhr consists of an N-terminal helicase domain (aa 1-856) with a distinctive tertiary structure (Lhr-Core) and a C-terminal domain (Lhr-CTD) of unknown structure. Here, we report that Escherichia coli Lhr (EcoLhr; 1538-aa) is an ATPase, translocase and ATP-dependent helicase. Like MsmLhr, EcoLhr translocates 3' to 5' on ssDNA and unwinds secondary structures en route, with RNA:DNA hybrid being preferred versus DNA:DNA duplex. The ATPase and translocase activities of EcoLhr inhere to its 877-aa Core domain. Full-length EcoLhr and MsmLhr have homo-oligomeric quaternary structures in solution, whereas their respective Core domains are monomers. The MsmLhr CTD per se is a homo-oligomer in solution. We employed cryo-EM to solve the structure of the CTD of full-length MsmLhr. The CTD protomer is composed of a series of five winged-helix (WH) modules and a beta-barrel module. The CTD adopts a unique homo-tetrameric quaternary structure. A Lhr-CTD subdomain, comprising three tandem WH modules and the beta-barrel, is structurally homologous to AlkZ, a bacterial DNA glycosylase that recognizes and excises inter-strand DNA crosslinks. This homology is noteworthy given that Lhr is induced in mycobacteria exposed to the inter-strand crosslinker mitomycin C. | ||
- | + | ==See Also== | |
- | + | *[[Helicase 3D structures|Helicase 3D structures]] | |
- | + | ||
- | + | ||
- | + | ||
- | == | + | |
- | + | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Bacillus smegmatis trevisan 1889]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Mycolicibacterium smegmatis]] |
- | [[Category: Patel | + | [[Category: Patel DJ]] |
- | [[Category: Shuman | + | [[Category: Shuman S]] |
- | [[Category: Wang | + | [[Category: Wang J]] |
- | [[Category: Warren | + | [[Category: Warren GM]] |
- | + | ||
- | + | ||
- | + |
Revision as of 14:59, 6 March 2024
cryo-EM structure of Mycobacterium smegmatis Lhr helicase C-terminal domain
|