Ubiquitin protein ligase 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 30: Line 30:
**[[2kiz]] – hUPL RING domain - NMR<br />
**[[2kiz]] – hUPL RING domain - NMR<br />
**[[5lg0]], [[5lg7]], [[7p2k]] – hUPL RING domain (mutant) - NMR<br />
**[[5lg0]], [[5lg7]], [[7p2k]] – hUPL RING domain (mutant) - NMR<br />
 +
 +
*'''Ubiquitin protein ligase Bard or BRCA1-associated ring domain protein'''
 +
 +
**[[7e8i]], [[7jzv]], [[7lyb]], [[7lyc]], [[8grq]] – hUPL 1 RING domain 26-122 in nucleosome – Cryo EM<br />
 +
**[[6m14]] – hUPL 1 residues 568-777<br />
 +
 +
*'''Ubiquitin protein ligase BIRC or baculoviral IAP repeat containing protein’'' ;Domains: BIR1 26-102; BIR2 175-256; BIR3 261-346
 +
 +
**[[6w74]] – hCIAP 2 260-352 + inhibitor <BR />
 +
**[[7qgj]] – hCIAP 2 BIR2 domain <BR />
 +
**[[6exw]], [[7trm]], [[8dsf]] – hCIAP 2 BIR3 domain + inhibitor <BR />
 +
**[[7trl]] – hCIAP 2 BIR3 domain + histone H3 <BR />
 +
**[[6w7o]], [[6w8i]], [[8dso]] – hCIAP 2 384-659 + BTK + inhibitor<BR />
 +
**[[6hpr]] – hCIAP 2 556-618 + E2 D2 + polyubiquitin-B<BR />
 +
**[[7nk0]] – hCIAP 3 BIR1 domain <BR />
 +
**[[8e2d]], [[8e2e]], [[8e2f]], [[8e2g]] – hCIAP 6 – Cryo EM <BR />
 +
**[[8auk]], [[8e2k]] – hCIAP 6 + HtrA2 – Cryo EM <BR />
 +
**[[8e2i]] – hCIAP 6 + Diablo IAP-binding protein – Cryo EM <BR />
*'''Ubiquitin protein ligase Bre1'''
*'''Ubiquitin protein ligase Bre1'''
-
**[[5trb]] – hUPL RNF20 domain<br />
+
**[[5trb]] – hUPL RNF20 domain 906-975<br />
-
**[[4r7e]] – hUPL RING domain<br />
+
**[[4r7e]] – hUPL RING domain 632-700<br />
 +
**[[8gui]], [[8guj]], [[8t3t]], [[8t3w]], [[8t3y]] – hUPL RING domain in nucleosome – Cryo EM<br />
 +
**[[8ieg]], [[8iej]] – hUPL 1A 915-974 + UPL 1B 941-1000 in nucleosome – Cryo EM<br />
 +
**[[7uv8]], [[7uvc]] – hUPL 1 residues 1-212 + E2 2 <br />
 +
**[[7w75]], [[7w76]] – UPL RBD 1-206 + Rad6 – ''Kluyveromyces lactis<''br />
*'''Ubiquitin protein ligase Cbl''' Domains:Tyr kinase-binding (TKB) 25-351;RING 358-437;WW3 399-432;catalytic 495-852; UBA 924-973-432
*'''Ubiquitin protein ligase Cbl''' Domains:Tyr kinase-binding (TKB) 25-351;RING 358-437;WW3 399-432;catalytic 495-852; UBA 924-973-432
Line 41: Line 63:
**[[5j3x]] – hUPL (mutant)<br />
**[[5j3x]] – hUPL (mutant)<br />
**[[1d5f]] – hUPL catalytic domain <br />
**[[1d5f]] – hUPL catalytic domain <br />
-
**[[2dk3]] – hUPL catalytic domain - NMR<br />
 
**[[1yiu]] – hUPL WW3 domain - NMR<br />
**[[1yiu]] – hUPL WW3 domain - NMR<br />
**[[2k4d]] – hUPL RING domain<br />
**[[2k4d]] – hUPL RING domain<br />
Line 55: Line 76:
**[[1yvh]], [[6xar]] – hUPL TKB domain + APS adaptor protein<br />
**[[1yvh]], [[6xar]] – hUPL TKB domain + APS adaptor protein<br />
-
**[[3bum]], [[3bun]], [[3buo]], [[3buw]], [[3bux]], [[3ob1]], [[3ob2]], [[3rlf]], [[3pfv]], [[2k4d]], [[4gpl]] – hUPL TKB domain + peptide <br />
+
**[[3bum]], [[3bun]], [[3buo]], [[3buw]], [[3bux]], [[3ob1]], [[3ob2]], [[3rlf]], [[3pfv]], [[2k4d]], [[4gpl]], [[5hl0]], [[7siy]] – hUPL TKB domain + peptide <br />
 +
**[[8gcy]], [[8qng]], [[8qnh]], [[8qni]], [[8qtj]], [[8qtk]] – hUPL TKB domain + inhibitor <br />
**[[6o02]], [[6o03]] – hUPL TKB domain + monobody<br />
**[[6o02]], [[6o03]] – hUPL TKB domain + monobody<br />
**[[2y1n]] – hUPL residues 47-435 + ZAP peptide <br />
**[[2y1n]] – hUPL residues 47-435 + ZAP peptide <br />
**[[5o76]] – hUPL residues 47-435 (mutant) + ZAP peptide <br />
**[[5o76]] – hUPL residues 47-435 (mutant) + ZAP peptide <br />
**[[4a49]] – hUPL RING domain + E2 D2 <br />
**[[4a49]] – hUPL RING domain + E2 D2 <br />
 +
**[[4a4b]], [[4a4c]] – hUPL TKB domain (mutant) + ZAP peptide + E2 D2<br />
**[[5axi]] – mUPL-B TKB domain + cblin <br />
**[[5axi]] – mUPL-B TKB domain + cblin <br />
Line 91: Line 114:
**[[4kbq]] – hUPL TPR domain + Hsc70<br />
**[[4kbq]] – hUPL TPR domain + Hsc70<br />
**[[6efk]], [[6nsv]] – hUPL TPR domain + Hsc70 peptide<br />
**[[6efk]], [[6nsv]] – hUPL TPR domain + Hsc70 peptide<br />
 +
**[[8fyu]] – hUPL TPR domain + Tau peptide<br />
 +
**[[7tb1]], [[8ehz]], [[8ei0]], [[8f14]], [[8f15]], [[8f16]], [[8f17]] – hUPL TPR domain + peptide<br />
*'''Ubiquitin protein ligase CNOT4'''
*'''Ubiquitin protein ligase CNOT4'''
Line 108: Line 133:
**[[6qtu]] – AtUPL WD40 domain + BBX peptide<br />
**[[6qtu]] – AtUPL WD40 domain + BBX peptide<br />
-
*'''Ubiquitin protein ligase DOA10'''
+
*'''Ubiquitin protein ligase DOA10 or ring-type E3 ubiquitin transferase DOA10'''
-
**[[2m6m]] – hUPL RING domain - NMR<br />
+
**[[8pd0]], [[8pda]] – yUPL – yeast - Cryo EM<br />
 +
**[[2m6m]] – yUPL RING domain 19-101 - NMR<br />
*'''Ubiquitin protein ligase DTX'''
*'''Ubiquitin protein ligase DTX'''
-
**[[6y5n]] – hUPL 1 RING-DTC domain <br />
+
**[[6y5n]] – hUPL 1 RING-DTC domain 388-620<br />
**[[6y5p]] – hUPL 1 RING-DTC domain + NAD<br />
**[[6y5p]] – hUPL 1 RING-DTC domain + NAD<br />
**[[3pg6]] – hUPL L3 C terminal <br />
**[[3pg6]] – hUPL L3 C terminal <br />
 +
**[[8r79]] – hUPL L3 D2 domain 126-200 <br />
-
*'''Ubiquitin protein ligase E3'''
+
*'''Ubiquitin protein ligase E3A or E6AP '''
-
**[[2y1m]] – hUPL - human<br />
+
**[[6tgk]] – hUPL C-lobe domain 765-869<br />
-
**[[1d5f]] – hUPL catalytic domain <br />
+
**[[7qpb]] – hUPL C-lobe domain + peptide<br />
-
**[[6tgk]] – hUPL C-lobe domain <br />
+
**[[8ept]] – hUPL AZUL domain 1-87<br />
-
**[[2dk3]] – hUPL catalytic domain - NMR<br />
+
**[[8enp]] – hUPL AZUL domain - NMR<br />
-
**[[1yiu]] – hUPL WW3 domain - NMR<br />
+
**[[1c4z]] – hUPL catalytic domain 518-875 + E2 <br />
-
**[[2oo9]], [[2ooa]], [[2oob]] – hUPL UBA domain <br />
+
-
**[[2do6]], [[2ekk]], [[2jnh]], [[2juj]] – hUPL UBA domain - NMR<br />
+
-
**[[3vgo]] – hUPL N terminal <br />
+
-
**[[2kr1]] – hUPL N terminal - NMR <br />
+
-
**[[2ldr]] – hUPL helix-RING domain - NMR <br />
+
-
**[[2d9s]] – mUPL UBA domain - NMR<br />
+
-
 
+
-
*Ubiquitin protein ligase E3 complex
+
-
 
+
-
**[[1yvh]] – hUPL TKB domain + APS adaptor protein<br />
+
-
**[[3bum]], [[3bun]], [[3buo]], [[3buw]], [[3bux]], [[3ob1]], [[3ob2]], [[3rlf]], [[3pfv]] – hUPL TKB domain + peptide <br />
+
-
**[[2y1n]] – hUPL residues 47-435 + ZAP peptide <br />
+
-
**[[4a4b]], [[4a4c]] – hUPL TKB domain (mutant) + ZAP peptide + E2 D2<br />
+
-
**[[1c4z]] – hUPL catalytic domain + E2 <br />
+
-
**[[4a49]] – hUPL residues 354-435 + E2 D2 <br />
+
*'''Ubiquitin protein ligase EDD1'''
*'''Ubiquitin protein ligase EDD1'''

Revision as of 10:31, 10 March 2024

3D Structures of ubiquitin protein ligase

Updated on 10-March-2024 - For a general description of the protein see Ubiquitin protein ligase

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky

Retrieved from "http://52.214.119.220/wiki/index.php/Ubiquitin_protein_ligase_3D_structures"
Personal tools