1nrf

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Current revision (13:28, 13 March 2024) (edit) (undo)
 
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<StructureSection load='1nrf' size='340' side='right'caption='[[1nrf]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='1nrf' size='340' side='right'caption='[[1nrf]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1nrf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"clostridium_licheniforme"_weigmann_1898 "clostridium licheniforme" weigmann 1898]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NRF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1NRF FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1nrf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NRF FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">blaR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1402 "Clostridium licheniforme" Weigmann 1898])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1nrf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nrf OCA], [http://pdbe.org/1nrf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1nrf RCSB], [http://www.ebi.ac.uk/pdbsum/1nrf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1nrf ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nrf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nrf OCA], [https://pdbe.org/1nrf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nrf RCSB], [https://www.ebi.ac.uk/pdbsum/1nrf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nrf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/BLAR_BACLI BLAR_BACLI]] BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis.
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[https://www.uniprot.org/uniprot/BLAR_BACLI BLAR_BACLI] BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nrf ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nrf ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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As in several staphylococci, the synthesis of the Bacillus licheniformis 749/I beta-lactamase is an inducible phenomenon regulated by a signal-transducing membrane protein BlaR. The C-terminal domain of this multimodular protein is an extracellular domain which specifically recognizes beta-lactam antibiotics. When it binds a beta-lactam, a signal is transmitted by the transmembrane region to the intracellular loops. In response, the hydrolytic activity of the BlaR large cytoplasmic L3 loop is induced, and a cascade of reactions is generated, leading to the transcription of the beta-lactamase gene. Here, we describe the crystal structure of the extracellular penicillin-receptor domain of BlaR (residues 346-601) at 2.5 A resolution in order to understand why this domain, whose folding is very similar to that of class D beta-lactamases, behaves as a highly sensitive penicillin-binding protein rather than a beta-lactamase. Two residues of the BlaR C-terminal domain, Thr452 and Thr542, modify the hydrophobic characteristic of the class D beta-lactamase active site. Both residues seem to be in part responsible for the lack of beta-lactamase activity of the BlaR protein due to the stability of the acyl-enzyme. Although further experimental data are needed to fully understand the transmembrane induction process, the comparison of the BlaR sensor domain structure with those of class D beta-lactamase complexes and penicillin-binding proteins provides interesting elements to hypothesize on possible signal transmission mechanisms.
 
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Crystal structure of the sensor domain of the BlaR penicillin receptor from Bacillus licheniformis.,Kerff F, Charlier P, Colombo ML, Sauvage E, Brans A, Frere JM, Joris B, Fonze E Biochemistry. 2003 Nov 11;42(44):12835-43. PMID:14596597<ref>PMID:14596597</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 1nrf" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Clostridium licheniforme weigmann 1898]]
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[[Category: Bacillus licheniformis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Brans, A]]
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[[Category: Brans A]]
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[[Category: Charlier, P]]
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[[Category: Charlier P]]
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[[Category: Columbo, M L]]
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[[Category: Columbo ML]]
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[[Category: Fonze, E]]
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[[Category: Fonze E]]
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[[Category: Frere, J M]]
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[[Category: Frere JM]]
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[[Category: Joris, B]]
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[[Category: Joris B]]
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[[Category: Kerff, F]]
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[[Category: Kerff F]]
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[[Category: Sauvage, E]]
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[[Category: Sauvage E]]
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[[Category: Bacillus licheniformi]]
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[[Category: Beta-lactamase induction]]
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[[Category: Membrane protein]]
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[[Category: Penicillin-binding protein]]
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[[Category: Penicillin-receptor]]
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Current revision

C-terminal domain of the Bacillus licheniformis BlaR penicillin-receptor

PDB ID 1nrf

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