2eb7
From Proteopedia
(Difference between revisions)
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<StructureSection load='2eb7' size='340' side='right'caption='[[2eb7]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2eb7' size='340' side='right'caption='[[2eb7]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2eb7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2eb7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EB7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EB7 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eb7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eb7 OCA], [https://pdbe.org/2eb7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eb7 RCSB], [https://www.ebi.ac.uk/pdbsum/2eb7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eb7 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eb7 TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eb7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eb7 OCA], [https://pdbe.org/2eb7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eb7 RCSB], [https://www.ebi.ac.uk/pdbsum/2eb7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eb7 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eb7 TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q96ZY1_SULTO Q96ZY1_SULTO] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eb7 ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eb7 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | The emergence of bacterial resistance to multiple drugs poses a serious and growing health concern. Understanding and deciphering the mechanisms of these multiple drug resistance regulatory proteins through structural or biochemical means is an important endeavor. Here, we present the crystal structure of ST1710 from Sulfolobus tokodaii strain 7 in two different crystal forms, at 1.80 and 2.0A, respectively. The overall structure of the ST1710 dimer shares the topology of the MarR family of proteins, with each subunit containing a winged helix-turn-helix DNA-binding motif. We also show the protein-DNA interactions by biochemical methods. Our molecular modeling analysis suggested that Asp88 and Arg90 are the key residues in ST1710 involved in the protein-DNA interactions. | ||
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| - | Crystal structure of the MarR family regulatory protein, ST1710, from Sulfolobus tokodaii strain 7.,Kumarevel T, Tanaka T, Nishio M, Gopinath SC, Takio K, Shinkai A, Kumar PK, Yokoyama S J Struct Biol. 2008 Jan;161(1):9-17. Epub 2007 Sep 8. PMID:17933554<ref>PMID:17933554</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 2eb7" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Sulfurisphaera tokodaii str. 7]] |
| - | [[Category: Kumarevel | + | [[Category: Kumarevel TS]] |
| - | [[Category: Nishio | + | [[Category: Nishio M]] |
| - | + | [[Category: Shinkai A]] | |
| - | [[Category: Shinkai | + | [[Category: Yokoyama S]] |
| - | [[Category: Yokoyama | + | |
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Current revision
Crystal structure of the hypothetical regulator from Sulfolobus tokodaii 7
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