3aqm

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Current revision (14:01, 13 March 2024) (edit) (undo)
 
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [https://pdbe.org/3aqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [https://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [https://pdbe.org/3aqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [https://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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PolyA polymerase (PAP) adds a polyA tail onto the 3'-end of RNAs without a nucleic acid template, using adenosine-5'-triphosphate (ATP) as a substrate. The mechanism for the substrate selection by eubacterial PAP remains obscure. Structural and biochemical studies of Escherichia coli PAP (EcPAP) revealed that the shape and size of the nucleobase-interacting pocket of EcPAP are maintained by an intra-molecular hydrogen-network, making it suitable for the accommodation of only ATP, using a single amino acid, Arg(197). The pocket structure is sustained by interactions between the catalytic domain and the RNA-binding domain. EcPAP has a flexible basic C-terminal region that contributes to optimal RNA translocation for processive adenosine 5'-monophosphate (AMP) incorporations onto the 3'-end of RNAs. A comparison of the EcPAP structure with those of other template-independent RNA polymerases suggests that structural changes of domain(s) outside the conserved catalytic core domain altered the substrate specificities of the template-independent RNA polymerases.
 
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Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases.,Toh Y, Takeshita D, Nagaike T, Numata T, Tomita K Structure. 2011 Feb 9;19(2):232-43. PMID:21300291<ref>PMID:21300291</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 3aqm" style="background-color:#fffaf0;"></div>
 
==See Also==
==See Also==
*[[Poly(A) polymerase 3D structures|Poly(A) polymerase 3D structures]]
*[[Poly(A) polymerase 3D structures|Poly(A) polymerase 3D structures]]
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== References ==
 
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<references/>
 
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Structure of bacterial protein (form II)

PDB ID 3aqm

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