6dey

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Current revision (14:33, 13 March 2024) (edit) (undo)
 
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<StructureSection load='6dey' size='340' side='right'caption='[[6dey]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
<StructureSection load='6dey' size='340' side='right'caption='[[6dey]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6dey]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DEY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DEY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6dey]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Elizabethkingia_meningoseptica Elizabethkingia meningoseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DEY FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BMF97_04835 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=238 ATCC 13253])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dey OCA], [http://pdbe.org/6dey PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dey RCSB], [http://www.ebi.ac.uk/pdbsum/6dey PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dey ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dey OCA], [https://pdbe.org/6dey PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dey RCSB], [https://www.ebi.ac.uk/pdbsum/6dey PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dey ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/A0A1V3U2Z4_ELIME A0A1V3U2Z4_ELIME]
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Aspartylglucosaminuria (AGU) is a lysosomal storage disorder caused by defects of the hydrolase glycosylasparaginase (GA). Previously, we showed that a Canadian AGU mutation disrupts an obligatory intramolecular autoprocessing with the enzyme trapped as an inactive precursor. Here, we report biochemical and structural characterizations of a model enzyme corresponding to a Finnish AGU allele, the T234I variant. Unlike the Canadian counterpart, the Finnish variant is capable of a slow autoprocessing to generate detectible hydrolyzation activity of the natural substrate of GA. We have determined a 1.6 A-resolution structure of the Finnish AGU model and built an enzyme-substrate complex to provide a structural basis for analyzing the negative effects of the point mutation on KM and kcat of the mature enzyme. ENZYME: Glycosylasparaginase or aspartylglucosaminidase, EC3.5.1.26.
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Biochemical and structural insights into an allelic variant causing the lysosomal storage disorder - aspartylglucosaminuria.,Pande S, Bizilj W, Guo HC FEBS Lett. 2018 Jul 11. doi: 10.1002/1873-3468.13190. PMID:29993127<ref>PMID:29993127</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6dey" style="background-color:#fffaf0;"></div>
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==See Also==
==See Also==
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*[[Asparaginase 3D structures|Asparaginase 3D structures]]
*[[Glycosylasparaginase|Glycosylasparaginase]]
*[[Glycosylasparaginase|Glycosylasparaginase]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 13253]]
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[[Category: Elizabethkingia meningoseptica]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Guo, H C]]
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[[Category: Guo HC]]
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[[Category: Laksminarasimhan, D]]
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[[Category: Laksminarasimhan D]]
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[[Category: Pande, S]]
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[[Category: Pande S]]
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[[Category: Hydrolase]]
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Current revision

Aspartylglucosaminuria mutant structure and function

PDB ID 6dey

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