6egc

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Current revision (14:41, 13 March 2024) (edit) (undo)
 
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<StructureSection load='6egc' size='340' side='right'caption='[[6egc]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
<StructureSection load='6egc' size='340' side='right'caption='[[6egc]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6egc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Synthetic_construct_sequences Synthetic construct sequences]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EGC FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6egc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6EGC FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6egc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6egc OCA], [http://pdbe.org/6egc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6egc RCSB], [http://www.ebi.ac.uk/pdbsum/6egc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6egc ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6egc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6egc OCA], [https://pdbe.org/6egc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6egc RCSB], [https://www.ebi.ac.uk/pdbsum/6egc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6egc ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Modular self-assembly of biomolecules in two dimensions (2D) is straightforward with DNA but has been difficult to realize with proteins, due to the lack of modular specificity similar to Watson-Crick base pairing. Here we describe a general approach to design 2D arrays using de novo designed pseudosymmetric protein building blocks. A homodimeric helical bundle was reconnected into a monomeric building block, and the surface was redesigned in Rosetta to enable self-assembly into a 2D array in the C12 layer symmetry group. Two out of ten designed arrays assembled to micrometer scale under negative stain electron microscopy, and displayed the designed lattice geometry with assembly size up to 100 nm under atomic force microscopy. The design of 2D arrays with pseudosymmetric building blocks is an important step toward the design of programmable protein self-assembly via pseudosymmetric patterning of orthogonal binding interfaces.
 
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Self-Assembling 2D Arrays with de Novo Protein Building Blocks.,Chen Z, Johnson MC, Chen J, Bick MJ, Boyken SE, Lin B, De Yoreo JJ, Kollman JM, Baker D, DiMaio F J Am Chem Soc. 2019 May 10. doi: 10.1021/jacs.9b01978. PMID:31050411<ref>PMID:31050411</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 6egc" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Synthetic construct sequences]]
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[[Category: Synthetic construct]]
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[[Category: Bick, M J]]
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[[Category: Bick MJ]]
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[[Category: Chen, Z]]
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[[Category: Chen Z]]
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[[Category: DiMaio, F]]
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[[Category: DiMaio F]]
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[[Category: Coiled-coil]]
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[[Category: Computational design]]
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[[Category: De novo protein]]
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[[Category: Helical bundle]]
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Current revision

Single-chain version of 2L4HC2_23 (PDB 5J0K)

PDB ID 6egc

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