6ubb

<table><tr><td colspan='2'>[[6ubb]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Aureobasidium_namibiae_cbs_147.97 Aureobasidium namibiae cbs 147.97]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UBB OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6UBB FirstGlance]. <br>

</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene></td></tr>

<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">M436DRAFT_66913 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1043004 Aureobasidium namibiae CBS 147.97])</td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ubb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ubb OCA], [http://pdbe.org/6ubb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ubb RCSB], [http://www.ebi.ac.uk/pdbsum/6ubb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ubb ProSAT]</span></td></tr>

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== Publication Abstract from PubMed ==

The fundamental and assorted roles of beta-1,3-glucans in nature are underpinned on diverse chemistry and molecular structures, demanding sophisticated and intricate enzymatic systems for their processing. In this work, the selectivity and modes of action of a glycoside hydrolase family active on beta-1,3-glucans were systematically investigated combining sequence similarity network, phylogeny, X-ray crystallography, enzyme kinetics, mutagenesis and molecular dynamics. This family exhibits a minimalist and versatile (alpha/beta)-barrel scaffold, which can harbor distinguishing exo or endo modes of action, including an ancillary-binding site for the anchoring of triple-helical beta-1,3-glucans. The substrate binding occurs via a hydrophobic knuckle complementary to the canonical curved conformation of beta-1,3-glucans or through a substrate conformational change imposed by the active-site topology of some fungal enzymes. Together, these findings expand our understanding of the enzymatic arsenal of bacteria and fungi for the breakdown and modification of beta-1,3-glucans, which can be exploited for biotechnological applications.

 

== References ==

[[Category: Aureobasidium namibiae cbs 147 97]]

[[Category: Cordeiro, R L]]

[[Category: Domingues, M N]]

[[Category: Murakami, M T]]

[[Category: Santos, C R]]

[[Category: Tomazini, A]]

[[Category: Vieira, P S]]

[[Category: Hydrolase]]