3s6u
From Proteopedia
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<StructureSection load='3s6u' size='340' side='right'caption='[[3s6u]], [[Resolution|resolution]] 2.70Å' scene=''> | <StructureSection load='3s6u' size='340' side='right'caption='[[3s6u]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3s6u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3s6u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ancylostoma_caninum Ancylostoma caninum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S6U FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s6u OCA], [https://pdbe.org/3s6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s6u RCSB], [https://www.ebi.ac.uk/pdbsum/3s6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s6u ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s6u OCA], [https://pdbe.org/3s6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s6u RCSB], [https://www.ebi.ac.uk/pdbsum/3s6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s6u ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | SCP/TAPS proteins are a diverse family of molecules in eukaryotes, including parasites. Despite their abundant occurrence in parasite secretomes, very little is known about their functions in parasitic nematodes, including blood-feeding hookworms. Current information indicates that SCP/TAPS proteins (called Ancylostoma-secreted proteins, ASPs) of the canine hookworm, Ancylostoma caninum, represent at least three distinct groups of proteins. This information, combined with comparative modelling, indicates that all known ASPs have an equatorial groove that binds extended structures, such as peptides or glycans. To elucidate structure-function relationships, we explored the three-dimensional crystal structure of an ASP (called Ac-ASP-7), which is highly up-regulated in expression in the transition of A. caninum larvae from a free-living to a parasitic stage. The topology of the N-terminal domain is consistent with pathogenesis-related proteins, and the C-terminal extension that resembles the fold of the Hinge domain. By anomalous diffraction, we identified a new metal binding site in the C-terminal extension of the protein. Ac-ASP-7 is in a monomer-dimer equilibrium, and crystal-packing analysis identified a dimeric structure which might resemble the homo-dimer in solution. The dimer interaction interface includes a novel binding site for divalent metal ions, and is proposed to serve as a binding site for proteins involved in the parasite-host interplay at the molecular level. Understanding this interplay and the integration of structural and functional data could lead to the design of new approaches for the control of parasitic diseases, with biotechnological outcomes. | ||
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- | Hookworm SCP/TAPS protein structure--A key to understanding host-parasite interactions and developing new interventions.,Osman A, Wang CK, Winter A, Loukas A, Tribolet L, Gasser RB, Hofmann A Biotechnol Adv. 2012 May-Jun;30(3):652-7. Epub 2011 Nov 15. PMID:22120067<ref>PMID:22120067</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 3s6u" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Ancylostoma caninum]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Gasser | + | [[Category: Gasser R]] |
- | [[Category: Hofmann | + | [[Category: Hofmann A]] |
- | [[Category: Loukas | + | [[Category: Loukas A]] |
- | [[Category: Osman | + | [[Category: Osman A]] |
- | [[Category: Tribolet | + | [[Category: Tribolet L]] |
- | [[Category: Wang | + | [[Category: Wang CK]] |
- | [[Category: Winter | + | [[Category: Winter A]] |
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Revision as of 12:48, 14 March 2024
Caclcium-bound Ac-ASP-7
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Categories: Ancylostoma caninum | Large Structures | Gasser R | Hofmann A | Loukas A | Osman A | Tribolet L | Wang CK | Winter A