4elv
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4elv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ELV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ELV FirstGlance]. <br> | <table><tr><td colspan='2'>[[4elv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ELV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ELV FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0R7:[[(2S,5R)-5-[4-AZANYL-5-[2-(4-ETHYNYLPHENYL)ETHYNYL]-2-OXIDANYLIDENE-PYRIMIDIN-1-YL]OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]+PHOSPHONO+HYDROGEN+PHOSPHATE'>0R7</scene>, <scene name='pdbligand=0R8:[(2S,5R)-5-{4-AMINO-5-[(4-ETHYNYLPHENYL)ETHYNYL]-2-OXOPYRIMIDIN-1(2H)-YL}TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+PHOSPHATE'>0R8</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0R7:[[(2S,5R)-5-[4-AZANYL-5-[2-(4-ETHYNYLPHENYL)ETHYNYL]-2-OXIDANYLIDENE-PYRIMIDIN-1-YL]OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]+PHOSPHONO+HYDROGEN+PHOSPHATE'>0R7</scene>, <scene name='pdbligand=0R8:[(2S,5R)-5-{4-AMINO-5-[(4-ETHYNYLPHENYL)ETHYNYL]-2-OXOPYRIMIDIN-1(2H)-YL}TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+PHOSPHATE'>0R8</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4elv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4elv OCA], [https://pdbe.org/4elv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4elv RCSB], [https://www.ebi.ac.uk/pdbsum/4elv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4elv ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4elv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4elv OCA], [https://pdbe.org/4elv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4elv RCSB], [https://www.ebi.ac.uk/pdbsum/4elv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4elv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/DPO1_THEAQ DPO1_THEAQ] | |
| + | |||
| + | ==See Also== | ||
| + | *[[DNA polymerase 3D structures|DNA polymerase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Current revision
Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing modified pyrimidines
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