3md3
From Proteopedia
(Difference between revisions)
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<StructureSection load='3md3' size='340' side='right'caption='[[3md3]], [[Resolution|resolution]] 2.70Å' scene=''> | <StructureSection load='3md3' size='340' side='right'caption='[[3md3]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3md3]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3md3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MD3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MD3 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3md3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3md3 OCA], [https://pdbe.org/3md3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3md3 RCSB], [https://www.ebi.ac.uk/pdbsum/3md3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3md3 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PUB1_YEAST PUB1_YEAST] May be associated with hnRNA within the nucleus and remains associated during nucleocytoplasmic mRNA transport, once the proteins are in the cytoplasm, disassembly of PUB1-RNA complexes may occur prior to PAB1 binding and formation of a translationally competent RNP complex. Binds to polyadenylated RNA; prefers to bind poly(rU); binds to T-rich single-stranded DNA. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Saccharomyces cerevisiae]] | [[Category: Saccharomyces cerevisiae]] | ||
| - | [[Category: Li | + | [[Category: Li H]] |
| - | [[Category: Niu | + | [[Category: Niu L]] |
| - | [[Category: Shi | + | [[Category: Shi H]] |
| - | [[Category: Teng | + | [[Category: Teng M]] |
| - | [[Category: Wang | + | [[Category: Wang H]] |
| - | [[Category: Zhu | + | [[Category: Zhu Z]] |
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Current revision
Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
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Categories: Large Structures | Saccharomyces cerevisiae | Li H | Niu L | Shi H | Teng M | Wang H | Zhu Z
