3slu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:36, 20 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3slu' size='340' side='right'caption='[[3slu]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
<StructureSection load='3slu' size='340' side='right'caption='[[3slu]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3slu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_atcc_13091 Neisseria meningitidis atcc 13091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SLU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SLU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3slu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_ATCC_13091 Neisseria meningitidis ATCC 13091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SLU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SLU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.41&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HMPREF0602_0018 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=862513 Neisseria meningitidis ATCC 13091])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3slu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3slu OCA], [https://pdbe.org/3slu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3slu RCSB], [https://www.ebi.ac.uk/pdbsum/3slu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3slu ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3slu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3slu OCA], [https://pdbe.org/3slu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3slu RCSB], [https://www.ebi.ac.uk/pdbsum/3slu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3slu ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/E0N688_NEIME E0N688_NEIME]
-
NMB0315 is an outer membrane protein of Neisseria meningitidis serogroup B (NMB) and a potential candidate for a broad-spectrum vaccine against meningococcal disease. The crystal structure of NMB0315 was solved by single-wavelength anomalous dispersion (SAD) at a resolution of 2.4 A and revealed to be a lysostaphin-type peptidase of the M23 metallopeptidase family. The overall structure consists of three well-separated domains and has no similarity to any previously published structure. However, only the topology of the carboxyl-terminal domain is highly conserved among members of this family, and this domain is a zinc-dependent catalytic unit. The amino-terminal domain of the structure blocks the substrate binding pocket in the carboxyl-terminal domain, indicating that the wild-type full-length protein is in an inactive conformational state. Our studies improve the understanding of the catalytic mechanism of M23 metallopeptidases.
+
-
 
+
-
Crystal structure of outer membrane protein NMB0315 from Neisseria meningitidis.,Wang X, Yang X, Yang C, Wu Z, Xu H, Shen Y PLoS One. 2011;6(10):e26845. Epub 2011 Oct 26. PMID:22046377<ref>PMID:22046377</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 3slu" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Neisseria meningitidis atcc 13091]]
+
[[Category: Neisseria meningitidis ATCC 13091]]
-
[[Category: Shen, Y]]
+
[[Category: Shen Y]]
-
[[Category: Wang, X]]
+
[[Category: Wang X]]
-
[[Category: Xu, H]]
+
[[Category: Xu H]]
-
[[Category: Yang, X]]
+
[[Category: Yang X]]
-
[[Category: Hydrolase]]
+
-
[[Category: Outer membrane]]
+

Current revision

Crystal structure of NMB0315

PDB ID 3slu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3slu"
Personal tools