3wkv

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Current revision (08:45, 20 March 2024) (edit) (undo)
 
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<StructureSection load='3wkv' size='340' side='right'caption='[[3wkv]], [[Resolution|resolution]] 3.45&Aring;' scene=''>
<StructureSection load='3wkv' size='340' side='right'caption='[[3wkv]], [[Resolution|resolution]] 3.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3wkv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WKV FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3wkv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WKV FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wkv OCA], [https://pdbe.org/3wkv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wkv RCSB], [https://www.ebi.ac.uk/pdbsum/3wkv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wkv ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.453&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wkv OCA], [https://pdbe.org/3wkv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wkv RCSB], [https://www.ebi.ac.uk/pdbsum/3wkv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wkv ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/HVCN1_MOUSE HVCN1_MOUSE] Mediates the voltage-dependent proton permeability of excitable membranes. Forms a proton-selective channel through which protons may pass in accordance with their electrochemical gradient. Proton efflux, accompanied by membrane depolarization, facilitates acute production of reactive oxygen species in phagocytosis (By similarity).
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The voltage-gated proton channel Hv1 (or VSOP) has a voltage-sensor domain (VSD) with dual roles of voltage sensing and proton permeation. Its gating is sensitive to pH and Zn(2+). Here we present a crystal structure of mouse Hv1 in the resting state at 3.45-A resolution. The structure showed a 'closed umbrella' shape with a long helix consisting of the cytoplasmic coiled coil and the voltage-sensing helix, S4, and featured a wide inner-accessible vestibule. Two out of three arginines in S4 were located below the phenylalanine constituting the gating charge-transfer center. The extracellular region of each protomer coordinated a Zn(2+), thus suggesting that Zn(2+) stabilizes the resting state of Hv1 by competing for acidic residues that otherwise form salt bridges with voltage-sensing positive charges on S4. These findings provide a platform for understanding the general principles of voltage sensing and proton permeation.
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X-ray crystal structure of voltage-gated proton channel.,Takeshita K, Sakata S, Yamashita E, Fujiwara Y, Kawanabe A, Kurokawa T, Okochi Y, Matsuda M, Narita H, Okamura Y, Nakagawa A Nat Struct Mol Biol. 2014 Apr;21(4):352-7. doi: 10.1038/nsmb.2783. Epub 2014 Mar , 2. PMID:24584463<ref>PMID:24584463</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3wkv" style="background-color:#fffaf0;"></div>
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==See Also==
==See Also==
*[[Ion channels 3D structures|Ion channels 3D structures]]
*[[Ion channels 3D structures|Ion channels 3D structures]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Fujiwara, Y]]
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[[Category: Fujiwara Y]]
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[[Category: Kawanabe, A]]
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[[Category: Kawanabe A]]
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[[Category: Kurokawa, T]]
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[[Category: Kurokawa T]]
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[[Category: Matsuda, M]]
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[[Category: Matsuda M]]
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[[Category: Nakagawa, A]]
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[[Category: Nakagawa A]]
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[[Category: Narita, H]]
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[[Category: Narita H]]
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[[Category: Okamura, Y]]
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[[Category: Okamura Y]]
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[[Category: Okochi, Y]]
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[[Category: Okochi Y]]
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[[Category: Sakata, S]]
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[[Category: Sakata S]]
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[[Category: Takeshita, K]]
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[[Category: Takeshita K]]
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[[Category: Yamashita, E]]
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[[Category: Yamashita E]]
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[[Category: Proton transport]]
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[[Category: Transmembrane helix/helix/membrane protein]]
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Current revision

Voltage-gated proton channel: VSOP/Hv1 chimeric channel

PDB ID 3wkv

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